Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12835

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,200,019	+		CA265_RS12830	0.69	+0.4
3,200,020	-		CA265_RS12830	0.69	+0.0
3,200,057	+		CA265_RS12830	0.70	-0.5
3,200,117	-		CA265_RS12830	0.72	-0.8
3,200,199	+		CA265_RS12830	0.76	-1.4
3,200,199	+		CA265_RS12830	0.76	+0.2
3,200,238	-		CA265_RS12830	0.77	+0.8
3,200,377	+		CA265_RS12830	0.83	+0.4
3,200,387	+		CA265_RS12830	0.83	+0.2
3,200,399	-		CA265_RS12830	0.84	+0.5
3,200,413	+		CA265_RS12830	0.84	-0.2
3,200,631	-				-1.2
3,200,639	-				+0.6
3,200,662	+				-0.5
3,200,662	+				+0.4
3,200,663	-				+0.1
3,200,663	-				+0.1
3,200,663	-				+0.1
3,200,663	-				+0.2
3,200,759	+				+0.1
3,200,792	-				+0.2
3,200,889	-				-0.9
3,200,915	+				-1.4
3,200,941	+				-1.4
3,200,969	+				+0.7
3,200,971	+				-0.7
3,200,971	+				-0.1
3,200,972	-				-0.9
3,200,973	+				-1.4
3,200,974	-				-4.0
3,200,979	-				-1.6
3,200,989	+				-2.9
3,201,027	-				-3.7
3,201,156	+		CA265_RS12835	0.20	-0.3
3,201,191	+		CA265_RS12835	0.24	-1.5
3,201,197	-		CA265_RS12835	0.24	-2.3
3,201,197	-		CA265_RS12835	0.24	-3.0
3,201,207	-		CA265_RS12835	0.25	-1.2
3,201,247	+		CA265_RS12835	0.30	-3.0
3,201,248	-		CA265_RS12835	0.30	-1.2
3,201,249	+		CA265_RS12835	0.30	-1.1
3,201,309	+		CA265_RS12835	0.37	-1.4
3,201,435	+		CA265_RS12835	0.51	-0.5
3,201,440	+		CA265_RS12835	0.52	-0.6
3,201,440	+		CA265_RS12835	0.52	-3.2
3,201,440	+		CA265_RS12835	0.52	-3.2
3,201,441	-		CA265_RS12835	0.52	-3.1
3,201,458	-		CA265_RS12835	0.54	-2.3
3,201,506	-		CA265_RS12835	0.59	-0.7
3,201,525	+		CA265_RS12835	0.62	-0.0
3,201,526	-		CA265_RS12835	0.62	-3.5
3,201,568	+		CA265_RS12835	0.67	-0.9
3,201,569	-		CA265_RS12835	0.67	-2.5
3,201,592	+		CA265_RS12835	0.69	-1.0
3,201,692	+		CA265_RS12835	0.81	-1.3
3,201,692	+		CA265_RS12835	0.81	-1.1
3,201,735	+		CA265_RS12835	0.86	-2.7
3,201,783	-				-2.3
3,201,859	+				-0.2
3,201,860	-				-0.3
3,201,873	+				-0.0
3,201,893	-				-1.2
3,201,985	-		CA265_RS12840	0.13	-1.0
3,202,081	-		CA265_RS12840	0.24	+0.1
3,202,093	-		CA265_RS12840	0.25	-0.9
3,202,116	+		CA265_RS12840	0.28	+0.2
3,202,118	+		CA265_RS12840	0.28	-1.5
3,202,118	+		CA265_RS12840	0.28	-1.5
3,202,120	-		CA265_RS12840	0.28	-0.7
3,202,181	+		CA265_RS12840	0.36	-0.8
3,202,181	+		CA265_RS12840	0.36	-1.2
3,202,182	-		CA265_RS12840	0.36	-0.1
3,202,182	-		CA265_RS12840	0.36	+0.6
3,202,195	+		CA265_RS12840	0.37	-0.8
3,202,195	+		CA265_RS12840	0.37	-1.0
3,202,195	+		CA265_RS12840	0.37	+0.1
3,202,196	-		CA265_RS12840	0.37	-1.0
3,202,219	-		CA265_RS12840	0.40	-0.9
3,202,366	+		CA265_RS12840	0.57	-0.1
3,202,367	-		CA265_RS12840	0.57	+1.0
3,202,367	-		CA265_RS12840	0.57	-0.2
3,202,410	+		CA265_RS12840	0.62	+0.5
3,202,492	-		CA265_RS12840	0.72	+1.7
3,202,580	+		CA265_RS12840	0.82	-0.5
3,202,610	+		CA265_RS12840	0.85	-0.6
3,202,637	-		CA265_RS12840	0.88	-1.4
3,202,654	-				-1.0
3,202,707	-				-0.4
3,202,720	-				-0.9
3,202,771	+				-0.5
3,202,784	-				-1.5
3,202,812	-				-1.9