Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11665

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,891,422	+		CA265_RS11660	0.70	-0.2
2,891,444	-		CA265_RS11660	0.71	+1.9
2,891,454	+		CA265_RS11660	0.71	+0.2
2,891,466	-		CA265_RS11660	0.72	+1.1
2,891,466	-		CA265_RS11660	0.72	+0.5
2,891,509	+		CA265_RS11660	0.74	-0.2
2,891,510	-		CA265_RS11660	0.74	-0.7
2,891,510	-		CA265_RS11660	0.74	-2.3
2,891,510	-		CA265_RS11660	0.74	-0.5
2,891,510	-		CA265_RS11660	0.74	+0.4
2,891,558	+		CA265_RS11660	0.76	-0.4
2,891,565	-		CA265_RS11660	0.76	+0.6
2,891,567	-		CA265_RS11660	0.76	-0.9
2,891,567	-		CA265_RS11660	0.76	-1.0
2,891,567	-		CA265_RS11660	0.76	+0.4
2,891,634	+		CA265_RS11660	0.79	-0.4
2,891,647	+		CA265_RS11660	0.80	-0.4
2,891,647	+		CA265_RS11660	0.80	-0.2
2,891,658	-		CA265_RS11660	0.80	-0.1
2,891,666	-		CA265_RS11660	0.80	-0.4
2,891,667	+		CA265_RS11660	0.80	-1.5
2,891,668	-		CA265_RS11660	0.80	-0.0
2,891,686	+		CA265_RS11660	0.81	+0.2
2,891,687	-		CA265_RS11660	0.81	+1.1
2,891,687	-		CA265_RS11660	0.81	+1.1
2,891,703	-		CA265_RS11660	0.82	-0.3
2,891,786	-		CA265_RS11660	0.86	-0.3
2,891,790	+		CA265_RS11660	0.86	-0.8
2,891,790	+		CA265_RS11660	0.86	+0.6
2,891,791	-		CA265_RS11660	0.86	-0.1
2,891,803	+		CA265_RS11660	0.86	+0.6
2,891,862	-		CA265_RS11660	0.89	-0.7
2,891,869	+		CA265_RS11660	0.89	+0.3
2,891,883	-		CA265_RS11660	0.90	+0.2
2,892,142	-				+0.9
2,892,207	-				+1.6
2,892,214	-				+0.9
2,892,269	-				+0.5
2,892,342	-				+2.0
2,894,886	-				-0.5
2,894,928	+				-0.4
2,894,940	-				-2.1
2,894,969	+				-0.7
2,894,979	+				+0.7
2,894,979	+				+0.9
2,894,999	+				-1.6
2,895,024	-		CA265_RS11670	0.10	-2.1
2,895,035	+		CA265_RS11670	0.13	-0.6
2,895,035	+		CA265_RS11670	0.13	-2.0
2,895,035	+		CA265_RS11670	0.13	-2.8
2,895,048	+		CA265_RS11670	0.17	-0.7
2,895,121	+		CA265_RS11670	0.35	-1.4
2,895,134	-		CA265_RS11670	0.38	-1.2
2,895,163	-		CA265_RS11670	0.46	-0.8
2,895,192	+		CA265_RS11670	0.53	-3.0
2,895,193	-		CA265_RS11670	0.53	-1.5
2,895,193	-		CA265_RS11670	0.53	-1.5
2,895,198	-		CA265_RS11670	0.55	-2.4
2,895,201	+		CA265_RS11670	0.55	-0.1
2,895,205	+		CA265_RS11670	0.56	-1.8
2,895,244	-		CA265_RS11670	0.66	-1.2
2,895,244	-		CA265_RS11670	0.66	-1.0
2,895,259	-		CA265_RS11670	0.70	+0.3
2,895,279	+		CA265_RS11670	0.75	-1.8
2,895,327	+		CA265_RS11670	0.88	+0.0
2,895,392	-				+0.6
2,895,549	-				+0.9
2,895,565	+		CA265_RS11675	0.11	-0.2
2,895,586	+		CA265_RS11675	0.12	+1.2
2,895,626	+		CA265_RS11675	0.16	+0.8
2,895,676	-		CA265_RS11675	0.20	-2.6
2,895,680	+				+0.5
2,895,691	-		CA265_RS11675	0.21	+0.5
2,895,696	-		CA265_RS11675	0.21	+1.0
2,895,698	+		CA265_RS11675	0.22	-0.2
2,895,698	+		CA265_RS11675	0.22	+0.3
2,895,699	-		CA265_RS11675	0.22	-0.8