Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11620

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,881,307	+		CA265_RS11620	0.11	-2.1
2,881,311	+		CA265_RS11620	0.11	-1.1
2,881,311	+		CA265_RS11620	0.11	-2.8
2,881,314	+		CA265_RS11620	0.11	-3.3
2,881,335	+		CA265_RS11620	0.14	-1.4
2,881,335	+		CA265_RS11620	0.14	-0.9
2,881,336	-		CA265_RS11620	0.14	-2.5
2,881,336	-		CA265_RS11620	0.14	-1.8
2,881,336	-		CA265_RS11620	0.14	-3.4
2,881,371	-		CA265_RS11620	0.17	-2.7
2,881,411	+		CA265_RS11620	0.21	-1.6
2,881,470	-		CA265_RS11620	0.28	-2.9
2,881,513	+		CA265_RS11620	0.32	-3.6
2,881,513	+		CA265_RS11620	0.32	-1.7
2,881,514	-		CA265_RS11620	0.32	-2.3
2,881,514	-		CA265_RS11620	0.32	-2.2
2,881,514	-		CA265_RS11620	0.32	-3.1
2,881,542	+		CA265_RS11620	0.35	-3.2
2,881,542	+		CA265_RS11620	0.35	-3.3
2,881,641	+		CA265_RS11620	0.45	-0.7
2,881,693	+		CA265_RS11620	0.51	-2.4
2,881,710	+		CA265_RS11620	0.53	-0.5
2,881,726	-				+0.7
2,881,748	-		CA265_RS11620	0.56	-2.9
2,881,750	-		CA265_RS11620	0.57	-2.5
2,881,750	-		CA265_RS11620	0.57	-2.7
2,881,797	-		CA265_RS11620	0.62	-1.4
2,881,802	-		CA265_RS11620	0.62	-1.4
2,881,872	-		CA265_RS11620	0.69	-0.3
2,881,891	+		CA265_RS11620	0.71	-0.7
2,881,891	+		CA265_RS11620	0.71	-2.4
2,881,917	+		CA265_RS11620	0.74	-1.3
2,881,958	+		CA265_RS11620	0.78	-1.8
2,881,959	-		CA265_RS11620	0.78	+1.7
2,881,959	-		CA265_RS11620	0.78	-3.1
2,881,972	-		CA265_RS11620	0.80	-3.0
2,881,991	+		CA265_RS11620	0.82	-3.2
2,881,996	-		CA265_RS11620	0.82	-2.2
2,882,006	-		CA265_RS11620	0.83	-1.1
2,882,006	-				+1.3
2,882,150	+				+0.2
2,882,150	+				+0.3
2,882,172	-				-0.3
2,882,298	-				-2.4
2,882,320	-				-0.1
2,882,321	+				+0.2
2,882,321	+				+0.2
2,882,348	+				-0.3
2,882,350	+				-0.7
2,882,350	+				-0.3
2,882,351	-				-0.7
2,882,466	+				-0.3
2,882,467	-				+0.3
2,882,484	+				+0.0
2,882,485	-				-1.4
2,882,485	-				-0.1
2,882,508	+				+2.2
2,882,513	+				+1.5
2,882,513	+				-0.4
2,882,543	+				-0.9
2,882,543	+				+3.1
2,882,622	+		CA265_RS11625	0.14	+0.2
2,882,624	+		CA265_RS11625	0.15	-2.3
2,882,624	+		CA265_RS11625	0.15	-0.2
2,882,628	+		CA265_RS11625	0.15	-0.8
2,882,629	-		CA265_RS11625	0.16	+0.7
2,882,629	-		CA265_RS11625	0.16	+0.5
2,882,688	+		CA265_RS11625	0.25	-0.1
2,882,688	+		CA265_RS11625	0.25	+0.3
2,882,689	-		CA265_RS11625	0.25	-0.1
2,882,705	+		CA265_RS11625	0.28	+0.1
2,882,716	-		CA265_RS11625	0.30	+0.5
2,882,859	+		CA265_RS11625	0.53	+0.6
2,882,860	-		CA265_RS11625	0.53	-0.1
2,882,860	-		CA265_RS11625	0.53	+1.6
2,882,947	+		CA265_RS11625	0.67	-0.5
2,882,948	-		CA265_RS11625	0.67	+0.3
2,883,061	-		CA265_RS11625	0.85	-0.0
2,883,085	+		CA265_RS11625	0.89	-0.9
2,883,110	-				-1.1