Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11275

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,790,056	+				-0.9
2,790,057	-				-1.5
2,790,057	-				+0.4
2,790,087	+				-0.2
2,790,088	-				-0.9
2,790,096	-				+1.0
2,790,149	-				-1.7
2,790,157	-				-2.6
2,790,157	-				+1.0
2,790,159	-				-0.4
2,790,214	-				-1.0
2,790,243	+				+0.3
2,790,396	+				-0.2
2,790,406	+				+0.4
2,790,421	+				+0.0
2,790,435	-				-0.3
2,790,468	+				-0.8
2,790,469	-				-0.4
2,790,511	-		CA265_RS11270	0.12	+1.3
2,790,531	+		CA265_RS11270	0.17	+1.3
2,790,531	+		CA265_RS11270	0.17	+0.3
2,790,587	-		CA265_RS11270	0.32	+2.7
2,790,587	-		CA265_RS11270	0.32	+2.0
2,790,686	+		CA265_RS11270	0.58	+0.4
2,790,711	-		CA265_RS11270	0.65	+0.8
2,790,719	+		CA265_RS11270	0.67	+0.5
2,790,786	+		CA265_RS11270	0.85	-0.6
2,790,787	-		CA265_RS11270	0.85	+1.9
2,790,874	+				-0.4
2,790,880	+				+0.1
2,790,891	-				+1.9
2,790,915	-				+1.6
2,791,060	+		CA265_RS11275	0.13	-0.8
2,791,152	+		CA265_RS11275	0.19	+0.5
2,791,384	+		CA265_RS11275	0.35	-0.3
2,791,385	-		CA265_RS11275	0.36	+2.2
2,791,435	-		CA265_RS11275	0.39	+1.1
2,791,463	+		CA265_RS11275	0.41	-0.2
2,791,464	-		CA265_RS11275	0.41	+0.2
2,791,466	+		CA265_RS11275	0.41	+0.3
2,791,634	+		CA265_RS11275	0.53	+0.1
2,791,635	-		CA265_RS11275	0.53	+2.0
2,791,644	+		CA265_RS11275	0.53	-0.1
2,791,645	-		CA265_RS11275	0.53	+1.3
2,791,674	+		CA265_RS11275	0.55	-0.5
2,791,675	-		CA265_RS11275	0.56	+1.7
2,791,679	-		CA265_RS11275	0.56	+1.6
2,791,732	+		CA265_RS11275	0.59	+0.1
2,791,735	+		CA265_RS11275	0.60	+1.2
2,791,888	+		CA265_RS11275	0.70	-0.3
2,792,108	+		CA265_RS11275	0.85	+0.1
2,792,108	+		CA265_RS11275	0.85	-0.1
2,792,109	-		CA265_RS11275	0.85	+0.9
2,792,140	+				+2.7
2,792,140	+		CA265_RS11275	0.88	-1.2
2,792,142	+		CA265_RS11275	0.88	-0.4
2,792,157	-		CA265_RS11275	0.89	+1.4
2,792,157	-		CA265_RS11275	0.89	+0.8
2,792,229	+				+0.7
2,792,237	-				+0.8
2,792,295	-				+1.1
2,792,295	-				+1.1
2,792,295	-				+0.9
2,792,304	-				-0.1
2,792,402	-				+2.4
2,792,447	+				-1.3
2,792,447	+				+0.3
2,792,448	-				+1.6
2,792,451	+				-0.7
2,792,543	+		CA265_RS11280	0.11	+1.1
2,792,632	-		CA265_RS11280	0.16	+1.8
2,792,644	+		CA265_RS11280	0.16	-0.1
2,792,685	+		CA265_RS11280	0.18	+0.4
2,792,704	-		CA265_RS11280	0.19	+1.1
2,792,704	-		CA265_RS11280	0.19	+1.2
2,792,707	+		CA265_RS11280	0.19	+0.8
2,792,715	+		CA265_RS11280	0.20	-0.9
2,792,716	-		CA265_RS11280	0.20	+2.1
2,792,716	-		CA265_RS11280	0.20	+1.4
2,792,847	-		CA265_RS11280	0.27	+1.5
2,792,921	-		CA265_RS11280	0.31	+0.4
2,792,949	+		CA265_RS11280	0.32	-0.6
2,792,949	+		CA265_RS11280	0.32	-0.6
2,792,995	+		CA265_RS11280	0.35	-0.2
2,792,998	+		CA265_RS11280	0.35	+0.4
2,792,999	-		CA265_RS11280	0.35	+1.2
2,793,008	+		CA265_RS11280	0.35	+0.2
2,793,027	+		CA265_RS11280	0.36	-0.0
2,793,084	+		CA265_RS11280	0.39	+0.5
2,793,085	-		CA265_RS11280	0.39	+0.9
2,793,133	-		CA265_RS11280	0.42	+1.1
2,793,202	-		CA265_RS11280	0.46	+0.8
2,793,202	-		CA265_RS11280	0.46	+0.9
2,793,207	-		CA265_RS11280	0.46	+0.7
2,793,278	+		CA265_RS11280	0.50	+0.1
2,793,279	-		CA265_RS11280	0.50	+0.9
2,793,284	-		CA265_RS11280	0.50	+0.9
2,793,289	+		CA265_RS11280	0.50	+0.4
2,793,289	+		CA265_RS11280	0.50	-0.5
2,793,290	-		CA265_RS11280	0.50	+0.4
2,793,290	-		CA265_RS11280	0.50	+0.7