Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11265

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,787,662	-		CA265_RS11260	0.74	+0.2
2,787,666	-		CA265_RS11260	0.74	-0.3
2,787,717	+		CA265_RS11260	0.76	-0.1
2,787,717	+		CA265_RS11260	0.76	-1.4
2,787,769	-		CA265_RS11260	0.78	+0.6
2,787,781	+		CA265_RS11260	0.78	+0.2
2,787,809	-		CA265_RS11260	0.79	+2.4
2,787,834	+		CA265_RS11260	0.80	+0.4
2,787,860	-		CA265_RS11260	0.81	+0.2
2,787,891	+		CA265_RS11260	0.82	-0.6
2,787,991	+		CA265_RS11260	0.85	+0.2
2,788,009	+		CA265_RS11260	0.86	-0.1
2,788,010	-		CA265_RS11260	0.86	-0.4
2,788,035	-		CA265_RS11260	0.87	+0.5
2,788,075	+		CA265_RS11260	0.88	+0.4
2,788,156	+				+0.1
2,788,160	+				-0.6
2,788,161	-				+0.8
2,788,228	+				-1.3
2,788,328	+				+0.1
2,788,392	-				+0.2
2,788,429	-				+0.1
2,788,498	+				-0.2
2,788,498	+				-0.5
2,788,532	+				-1.1
2,788,551	+				+0.0
2,788,580	-				+0.0
2,788,662	+				-0.8
2,788,676	+				+0.1
2,788,676	+				+0.3
2,788,718	+				-0.1
2,788,755	+		CA265_RS11265	0.11	-0.4
2,788,755	+		CA265_RS11265	0.11	-0.8
2,788,760	+		CA265_RS11265	0.11	+0.7
2,788,788	+		CA265_RS11265	0.13	-0.7
2,788,863	-		CA265_RS11265	0.18	+0.0
2,788,863	-		CA265_RS11265	0.18	-1.9
2,788,863	-		CA265_RS11265	0.18	+1.8
2,788,863	-		CA265_RS11265	0.18	-1.0
2,789,063	+		CA265_RS11265	0.32	-0.3
2,789,064	-		CA265_RS11265	0.32	-3.0
2,789,086	-		CA265_RS11265	0.34	-0.4
2,789,106	-		CA265_RS11265	0.35	-0.3
2,789,106	-		CA265_RS11265	0.35	-2.3
2,789,122	+		CA265_RS11265	0.36	-0.5
2,789,150	+		CA265_RS11265	0.38	+1.3
2,789,212	+		CA265_RS11265	0.42	-0.8
2,789,253	+		CA265_RS11265	0.45	-0.8
2,789,253	+		CA265_RS11265	0.45	-0.2
2,789,268	-		CA265_RS11265	0.46	-0.2
2,789,268	-		CA265_RS11265	0.46	-1.2
2,789,269	+		CA265_RS11265	0.46	+0.2
2,789,270	-		CA265_RS11265	0.46	-1.0
2,789,270	-		CA265_RS11265	0.46	-1.0
2,789,351	+		CA265_RS11265	0.52	+1.5
2,789,450	+		CA265_RS11265	0.59	-0.0
2,789,450	+		CA265_RS11265	0.59	+0.8
2,789,451	-		CA265_RS11265	0.59	+0.3
2,789,564	-		CA265_RS11265	0.67	+0.4
2,789,567	-		CA265_RS11265	0.67	-0.4
2,789,567	-		CA265_RS11265	0.67	+0.7
2,789,616	-				-0.2
2,789,628	-		CA265_RS11265	0.71	+0.5
2,789,628	-		CA265_RS11265	0.71	-0.2
2,789,647	-		CA265_RS11265	0.72	+0.4
2,789,651	+		CA265_RS11265	0.73	+1.3
2,789,720	-		CA265_RS11265	0.78	+0.2
2,789,801	+		CA265_RS11265	0.83	+0.6
2,789,801	+		CA265_RS11265	0.83	+0.0
2,789,802	-		CA265_RS11265	0.83	-1.8
2,789,850	-		CA265_RS11265	0.87	-0.2
2,790,056	+				-0.9
2,790,057	-				-1.5
2,790,057	-				+0.4
2,790,087	+				-0.2
2,790,088	-				-0.9
2,790,096	-				+1.0
2,790,149	-				-1.7
2,790,157	-				-2.6
2,790,157	-				+1.0
2,790,159	-				-0.4
2,790,214	-				-1.0
2,790,243	+				+0.3
2,790,396	+				-0.2
2,790,406	+				+0.4
2,790,421	+				+0.0
2,790,435	-				-0.3
2,790,468	+				-0.8
2,790,469	-				-0.4
2,790,511	-		CA265_RS11270	0.12	+1.3
2,790,531	+		CA265_RS11270	0.17	+1.3
2,790,531	+		CA265_RS11270	0.17	+0.3
2,790,587	-		CA265_RS11270	0.32	+2.7
2,790,587	-		CA265_RS11270	0.32	+2.0
2,790,686	+		CA265_RS11270	0.58	+0.4
2,790,711	-		CA265_RS11270	0.65	+0.8
2,790,719	+		CA265_RS11270	0.67	+0.5
2,790,786	+		CA265_RS11270	0.85	-0.6
2,790,787	-		CA265_RS11270	0.85	+1.9
2,790,874	+				-0.4
2,790,880	+				+0.1
2,790,891	-				+1.9
2,790,915	-				+1.6