Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10985

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,698,315	-				+0.4
2,698,363	-		CA265_RS10980	0.10	-0.5
2,698,447	-		CA265_RS10980	0.19	+0.5
2,698,466	+		CA265_RS10980	0.20	+1.2
2,698,478	+		CA265_RS10980	0.22	+3.9
2,698,490	+		CA265_RS10980	0.23	+1.0
2,698,581	+		CA265_RS10980	0.32	+1.1
2,698,601	+		CA265_RS10980	0.34	+1.2
2,698,663	+		CA265_RS10980	0.40	+0.6
2,698,769	+		CA265_RS10980	0.51	+1.4
2,698,788	+		CA265_RS10980	0.53	+1.0
2,698,836	+		CA265_RS10980	0.57	+1.4
2,698,836	+		CA265_RS10980	0.57	+1.6
2,698,845	+		CA265_RS10980	0.58	+1.0
2,698,881	+		CA265_RS10980	0.62	+0.6
2,698,916	+		CA265_RS10980	0.65	+0.3
2,698,916	+		CA265_RS10980	0.65	-0.1
2,698,917	-		CA265_RS10980	0.65	-0.8
2,699,017	+		CA265_RS10980	0.75	+0.7
2,699,077	-		CA265_RS10980	0.81	+1.3
2,699,098	+		CA265_RS10980	0.83	+0.5
2,699,126	-		CA265_RS10980	0.86	+1.5
2,699,138	+		CA265_RS10980	0.87	+0.3
2,699,141	+		CA265_RS10980	0.88	+1.1
2,699,142	-		CA265_RS10980	0.88	+2.5
2,699,147	+		CA265_RS10980	0.88	-0.7
2,699,227	+				+0.7
2,699,312	+				+1.3
2,699,339	-				+2.4
2,699,346	+		CA265_RS10985	0.10	-1.4
2,699,373	-		CA265_RS10985	0.18	-0.8
2,699,458	-		CA265_RS10985	0.42	-0.8
2,699,458	-		CA265_RS10985	0.42	+0.2
2,699,458	-		CA265_RS10985	0.42	-2.0
2,699,462	-		CA265_RS10985	0.43	-0.4
2,699,490	+		CA265_RS10985	0.51	-0.6
2,699,532	+		CA265_RS10985	0.64	-2.1
2,699,542	+		CA265_RS10985	0.66	+0.6
2,699,602	-		CA265_RS10985	0.84	-0.4
2,699,634	+				-0.1
2,699,675	+				-1.2
2,699,675	+				-0.0
2,699,675	-				-0.6
2,699,676	-				-0.9
2,699,727	+				+0.0
2,699,777	+		CA265_RS10990	0.12	+0.9
2,699,777	+		CA265_RS10990	0.12	+0.7
2,699,805	+		CA265_RS10990	0.16	+0.4
2,700,011	+		CA265_RS10990	0.43	+0.9
2,700,077	+		CA265_RS10990	0.52	-0.4
2,700,166	+		CA265_RS10990	0.63	+0.3
2,700,166	+		CA265_RS10990	0.63	+1.8
2,700,166	+		CA265_RS10990	0.63	+1.6
2,700,214	+		CA265_RS10990	0.70	+0.3
2,700,214	+		CA265_RS10990	0.70	-0.1
2,700,288	+		CA265_RS10990	0.79	+1.4
2,700,351	+		CA265_RS10990	0.87	+0.6
2,700,376	-				+0.0
2,700,457	-				+2.4
2,700,607	+				-0.5
2,700,607	+				+0.9
2,700,610	+				+0.4
2,700,626	+				-0.8
2,700,639	+				+0.2
2,700,639	+				+0.5
2,700,640	-				+1.9