Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10220

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,511,592	+		CA265_RS10215	0.47	+1.2
2,511,689	+		CA265_RS10215	0.53	-1.1
2,511,690	-		CA265_RS10215	0.53	+2.4
2,511,730	+		CA265_RS10215	0.56	+0.4
2,511,730	+		CA265_RS10215	0.56	+0.3
2,511,745	+		CA265_RS10215	0.57	-0.7
2,511,798	-		CA265_RS10215	0.60	+1.6
2,511,835	-				+0.8
2,511,835	-		CA265_RS10215	0.63	+1.7
2,511,904	-		CA265_RS10215	0.67	+0.8
2,511,904	-		CA265_RS10215	0.67	+1.3
2,511,939	+		CA265_RS10215	0.69	+1.0
2,511,998	-		CA265_RS10215	0.73	+1.5
2,512,075	-		CA265_RS10215	0.78	-0.0
2,512,144	+		CA265_RS10215	0.82	-0.3
2,512,242	+		CA265_RS10215	0.88	+0.4
2,512,242	+		CA265_RS10215	0.88	+0.1
2,512,311	-				+0.3
2,512,394	-				-0.6
2,512,410	+				+0.8
2,512,411	-				+0.6
2,512,419	+				-0.1
2,512,451	+				-0.2
2,512,517	-				+2.7
2,512,517	-				+2.2
2,512,541	-				+2.8
2,512,604	+		CA265_RS10220	0.13	+0.9
2,512,605	-		CA265_RS10220	0.13	+2.8
2,512,661	-		CA265_RS10220	0.17	+3.4
2,512,665	+		CA265_RS10220	0.17	+0.2
2,512,744	+		CA265_RS10220	0.23	-0.5
2,512,744	+		CA265_RS10220	0.23	+0.1
2,512,745	-		CA265_RS10220	0.23	+3.0
2,512,745	-		CA265_RS10220	0.23	+2.4
2,512,747	+		CA265_RS10220	0.23	-0.1
2,512,801	-		CA265_RS10220	0.27	+2.5
2,512,801	-		CA265_RS10220	0.27	+2.5
2,512,873	+		CA265_RS10220	0.32	+0.6
2,512,873	+		CA265_RS10220	0.32	-0.4
2,512,874	-		CA265_RS10220	0.32	+2.6
2,512,926	-		CA265_RS10220	0.36	+2.5
2,512,981	+		CA265_RS10220	0.40	+0.3
2,513,209	+		CA265_RS10220	0.56	-0.6
2,513,269	+		CA265_RS10220	0.60	+0.5
2,513,270	-		CA265_RS10220	0.60	+2.7
2,513,296	+		CA265_RS10220	0.62	+0.7
2,513,316	-		CA265_RS10220	0.64	+2.2
2,513,371	-		CA265_RS10220	0.68	+2.1
2,513,451	-		CA265_RS10220	0.74	+2.1
2,513,458	+		CA265_RS10220	0.74	-0.2
2,513,458	+		CA265_RS10220	0.74	+0.4
2,513,459	-		CA265_RS10220	0.74	+2.0
2,513,459	-		CA265_RS10220	0.74	+1.2
2,513,461	-		CA265_RS10220	0.74	+2.6
2,513,481	+		CA265_RS10220	0.76	+1.6
2,513,481	+		CA265_RS10220	0.76	+0.6
2,513,482	-		CA265_RS10220	0.76	+1.2
2,513,482	-		CA265_RS10220	0.76	+0.9
2,513,482	-		CA265_RS10220	0.76	+0.8
2,513,522	-		CA265_RS10220	0.79	+0.9
2,513,524	-		CA265_RS10220	0.79	+1.7
2,513,585	-		CA265_RS10220	0.83	+2.4
2,513,631	+		CA265_RS10220	0.86	+0.2
2,513,632	-		CA265_RS10220	0.87	+1.5
2,513,639	-		CA265_RS10220	0.87	+1.3
2,513,695	-				+1.2
2,513,695	-				+1.3
2,513,745	-				+1.8
2,513,793	-				+1.1
2,513,798	-				+1.6
2,513,820	-				+1.7
2,513,874	-				+3.3
2,514,018	+		CA265_RS10225	0.11	-0.3
2,514,045	+		CA265_RS10225	0.13	-1.2
2,514,049	+		CA265_RS10225	0.13	-1.0
2,514,093	-		CA265_RS10225	0.16	+2.9
2,514,108	-		CA265_RS10225	0.17	+3.9
2,514,166	-		CA265_RS10225	0.21	+3.5
2,514,177	+		CA265_RS10225	0.22	+1.0
2,514,252	+		CA265_RS10225	0.28	-0.1
2,514,252	+		CA265_RS10225	0.28	+0.1
2,514,297	+		CA265_RS10225	0.31	+0.1
2,514,343	-		CA265_RS10225	0.34	+3.2
2,514,410	+		CA265_RS10225	0.39	+1.3
2,514,415	+		CA265_RS10225	0.40	+1.9
2,514,455	+		CA265_RS10225	0.43	+1.3
2,514,456	-		CA265_RS10225	0.43	+2.8
2,514,456	-		CA265_RS10225	0.43	+2.3
2,514,494	+		CA265_RS10225	0.45	-1.2
2,514,564	+		CA265_RS10225	0.50	+1.2
2,514,565	-		CA265_RS10225	0.51	+2.0
2,514,616	-		CA265_RS10225	0.54	+2.7
2,514,676	+		CA265_RS10225	0.59	-1.5
2,514,685	+		CA265_RS10225	0.59	-0.8
2,514,753	+		CA265_RS10225	0.64	+0.3
2,514,753	+		CA265_RS10225	0.64	+1.0