Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09625

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,378,452	-		CA265_RS09620	0.35	+1.2
2,378,559	-		CA265_RS09620	0.42	+0.9
2,378,601	-		CA265_RS09620	0.45	+1.0
2,378,676	-		CA265_RS09620	0.51	+0.3
2,378,691	+		CA265_RS09620	0.52	+0.8
2,378,754	-		CA265_RS09620	0.56	+0.4
2,378,786	+		CA265_RS09620	0.58	+0.2
2,378,805	+		CA265_RS09620	0.60	-0.7
2,378,810	+		CA265_RS09620	0.60	+0.8
2,378,867	+		CA265_RS09620	0.64	+0.5
2,378,888	-		CA265_RS09620	0.66	-0.1
2,378,888	-		CA265_RS09620	0.66	+0.2
2,378,922	+		CA265_RS09620	0.68	-0.7
2,379,002	+		CA265_RS09620	0.74	+0.1
2,379,036	-		CA265_RS09620	0.76	+0.0
2,379,284	+				-0.2
2,379,360	-				+1.4
2,379,741	-				+0.7
2,379,750	-				+0.2
2,379,780	+				+0.6
2,379,782	+				+0.1
2,379,830	+				-0.6
2,379,849	+				+1.4
2,379,850	-				+0.1
2,379,850	-				+0.5
2,379,880	-				+0.8
2,379,880	-				+0.7
2,379,934	+				+0.8
2,379,993	+		CA265_RS09630	0.12	-0.2
2,380,025	-		CA265_RS09630	0.15	-0.4
2,380,064	+		CA265_RS09630	0.18	+0.9
2,380,077	+		CA265_RS09630	0.19	-0.4
2,380,078	-		CA265_RS09630	0.19	-1.1
2,380,098	+		CA265_RS09630	0.21	-0.5
2,380,101	-		CA265_RS09630	0.21	-1.0
2,380,101	-		CA265_RS09630	0.21	+0.1
2,380,107	+		CA265_RS09630	0.21	-0.4
2,380,108	-		CA265_RS09630	0.21	-1.3
2,380,188	+		CA265_RS09630	0.28	+0.3
2,380,198	-		CA265_RS09630	0.29	-0.2
2,380,203	+		CA265_RS09630	0.29	+0.2
2,380,447	+		CA265_RS09630	0.50	+0.9
2,380,448	-		CA265_RS09630	0.50	-0.5
2,380,491	-		CA265_RS09630	0.54	-0.1
2,380,594	+		CA265_RS09630	0.62	+0.2
2,380,659	+		CA265_RS09630	0.68	+1.3
2,380,659	+		CA265_RS09630	0.68	+0.9
2,380,727	-		CA265_RS09630	0.73	-0.6