Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09200

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,292,612	-		CA265_RS09195	0.65	-2.4
2,292,720	+		CA265_RS09195	0.72	-1.7
2,292,742	-		CA265_RS09195	0.74	-4.1
2,292,777	+		CA265_RS09195	0.76	-3.0
2,292,870	+		CA265_RS09195	0.83	-2.9
2,292,876	-		CA265_RS09195	0.84	-3.7
2,292,876	-		CA265_RS09195	0.84	-1.9
2,293,101	-				-1.8
2,293,116	-				-0.8
2,293,179	+				-0.8
2,293,215	+				-0.0
2,293,224	+				+0.1
2,293,224	+				-1.4
2,293,355	-		CA265_RS09200	0.11	+4.8
2,293,358	+		CA265_RS09200	0.12	-1.5
2,293,358	+		CA265_RS09200	0.12	-0.3
2,293,372	+		CA265_RS09200	0.13	+0.3
2,293,380	-		CA265_RS09200	0.13	+3.6
2,293,469	-		CA265_RS09200	0.20	+3.4
2,293,472	-		CA265_RS09200	0.21	+2.9
2,293,500	-		CA265_RS09200	0.23	+3.4
2,293,519	-		CA265_RS09200	0.24	+3.4
2,293,582	+		CA265_RS09200	0.29	+0.8
2,293,587	+		CA265_RS09200	0.30	-0.2
2,293,591	+		CA265_RS09200	0.30	-0.3
2,293,591	+		CA265_RS09200	0.30	+0.2
2,293,599	+		CA265_RS09200	0.31	-0.5
2,293,600	-		CA265_RS09200	0.31	+2.8
2,293,603	+		CA265_RS09200	0.31	+0.3
2,293,617	+		CA265_RS09200	0.32	+0.1
2,293,749	-		CA265_RS09200	0.43	+3.7
2,293,762	+		CA265_RS09200	0.44	+0.1
2,293,763	-		CA265_RS09200	0.44	+2.8
2,293,771	-		CA265_RS09200	0.45	+3.1
2,293,824	+		CA265_RS09200	0.49	+0.7
2,293,841	-		CA265_RS09200	0.50	+3.3
2,293,870	+		CA265_RS09200	0.53	-0.4
2,293,931	-		CA265_RS09200	0.57	+2.6
2,293,943	+		CA265_RS09200	0.58	+0.1
2,293,944	-		CA265_RS09200	0.58	+2.8
2,294,162	+		CA265_RS09200	0.76	-0.4
2,294,303	-		CA265_RS09200	0.87	+1.4
2,294,304	+		CA265_RS09200	0.87	+3.1
2,294,304	+		CA265_RS09200	0.87	+0.4
2,294,305	-		CA265_RS09200	0.87	+1.4
2,294,577	-				+3.7
2,294,599	-				+4.0
2,294,605	+				+0.3
2,294,605	+				-0.4
2,294,732	-				+1.8
2,294,732	-				+4.0
2,294,776	+				+0.0
2,294,777	-				+3.4
2,294,898	-				+3.1
2,294,926	-				+3.1
2,294,947	-				+2.9
2,294,947	-				+2.8
2,294,990	-				+2.6
2,295,051	+		CA265_RS09205	0.11	+1.2
2,295,119	-		CA265_RS09205	0.14	+2.5
2,295,153	-		CA265_RS09205	0.16	+1.5
2,295,157	-		CA265_RS09205	0.16	+2.7
2,295,175	-		CA265_RS09205	0.17	+2.5
2,295,175	-		CA265_RS09205	0.17	+2.5
2,295,274	+		CA265_RS09205	0.22	+0.6
2,295,275	-		CA265_RS09205	0.22	+1.7
2,295,337	+		CA265_RS09205	0.25	+0.7
2,295,424	-		CA265_RS09205	0.29	+1.1
2,295,424	-		CA265_RS09205	0.29	+0.6
2,295,434	+		CA265_RS09205	0.29	-0.8
2,295,434	+		CA265_RS09205	0.29	-1.5