Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08800

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,201,890	-		CA265_RS08795	0.62	+1.8
2,201,890	-		CA265_RS08795	0.62	+0.5
2,201,937	+		CA265_RS08795	0.64	+0.7
2,201,988	-		CA265_RS08795	0.67	-0.8
2,201,994	-		CA265_RS08795	0.67	-0.3
2,202,024	+		CA265_RS08795	0.69	-0.2
2,202,165	+		CA265_RS08795	0.75	-0.6
2,202,177	-		CA265_RS08795	0.76	-0.9
2,202,183	+		CA265_RS08795	0.76	-0.0
2,202,218	+		CA265_RS08795	0.78	-0.3
2,202,219	-		CA265_RS08795	0.78	-0.1
2,202,219	-		CA265_RS08795	0.78	-0.8
2,202,222	+		CA265_RS08795	0.78	-0.1
2,202,297	-		CA265_RS08795	0.82	-0.1
2,202,420	+		CA265_RS08795	0.88	+0.5
2,202,421	-		CA265_RS08795	0.88	+0.2
2,202,421	-		CA265_RS08795	0.88	-0.4
2,202,431	+		CA265_RS08795	0.88	-1.0
2,202,523	+				+0.4
2,202,523	+				+0.8
2,202,524	-				-0.1
2,202,524	-				-0.2
2,202,554	-				+0.6
2,202,563	+				+0.7
2,202,564	-				+0.0
2,202,564	-				-0.8
2,202,564	-				-2.1
2,202,747	+				+0.4
2,202,747	+				-0.3
2,202,766	-				-1.3
2,202,855	-				-1.3
2,202,859	-				-2.7
2,202,899	+				+0.6
2,202,900	-				-1.5
2,202,900	-				-0.9
2,202,911	+				-0.5
2,202,946	+				-0.1
2,202,946	+				+0.4
2,202,947	-				+0.9
2,202,982	+		CA265_RS08800	0.13	-1.1
2,202,994	+		CA265_RS08800	0.14	+0.7
2,202,994	+		CA265_RS08800	0.14	+0.4
2,202,994	+		CA265_RS08800	0.14	+0.4
2,202,995	-		CA265_RS08800	0.14	-0.0
2,203,026	-		CA265_RS08800	0.18	-0.9
2,203,032	-		CA265_RS08800	0.18	-0.2
2,203,131	+		CA265_RS08800	0.29	+0.7
2,203,187	-		CA265_RS08800	0.35	-1.1
2,203,187	-		CA265_RS08800	0.35	+0.5
2,203,211	+		CA265_RS08800	0.38	+0.1
2,203,214	+		CA265_RS08800	0.38	+0.8
2,203,217	-		CA265_RS08800	0.38	+0.4
2,203,240	-		CA265_RS08800	0.41	+0.5
2,203,242	-		CA265_RS08800	0.41	-1.3
2,203,242	-		CA265_RS08800	0.41	+0.4
2,203,242	-		CA265_RS08800	0.41	+0.4
2,203,243	+		CA265_RS08800	0.41	-0.5
2,203,244	-		CA265_RS08800	0.41	+0.4
2,203,292	+		CA265_RS08800	0.46	+0.7
2,203,424	+		CA265_RS08800	0.60	-0.1
2,203,425	-		CA265_RS08800	0.60	+0.8
2,203,526	-		CA265_RS08800	0.71	+0.5
2,203,606	+		CA265_RS08800	0.80	+0.1
2,203,616	+		CA265_RS08800	0.81	+1.1
2,203,621	+		CA265_RS08800	0.81	+0.2
2,203,622	-		CA265_RS08800	0.82	-1.3
2,203,622	-		CA265_RS08800	0.82	-0.8
2,203,622	-		CA265_RS08800	0.82	+0.8
2,203,691	+		CA265_RS08800	0.89	-1.4
2,203,718	+				+0.3
2,203,763	+				+0.3
2,203,851	+				+0.5
2,203,852	-				+0.2
2,203,852	-				+0.2
2,203,865	-				+1.2
2,203,867	+				+0.3
2,203,905	+				-0.3
2,203,913	+				+0.3
2,203,914	-				+1.0
2,203,945	+		CA265_RS08805	0.13	+0.2
2,203,962	+		CA265_RS08805	0.14	+1.8
2,203,989	-		CA265_RS08805	0.17	-0.2
2,204,031	+		CA265_RS08805	0.21	+1.8
2,204,031	+		CA265_RS08805	0.21	-0.3
2,204,032	-		CA265_RS08805	0.21	+1.2
2,204,032	-		CA265_RS08805	0.21	-0.2
2,204,055	-		CA265_RS08805	0.24	+1.8
2,204,075	-		CA265_RS08805	0.26	+0.8
2,204,106	-		CA265_RS08805	0.29	+2.4
2,204,111	+		CA265_RS08805	0.29	+0.4
2,204,112	-		CA265_RS08805	0.29	-0.5
2,204,158	-		CA265_RS08805	0.34	+0.9
2,204,158	-		CA265_RS08805	0.34	-0.9
2,204,219	+		CA265_RS08805	0.40	-0.5
2,204,221	+		CA265_RS08805	0.40	+0.8
2,204,232	-		CA265_RS08805	0.41	-0.3
2,204,248	+		CA265_RS08805	0.43	+0.4
2,204,249	-		CA265_RS08805	0.43	-0.6
2,204,251	-		CA265_RS08805	0.43	+0.3
2,204,256	-		CA265_RS08805	0.43	+0.5
2,204,351	-		CA265_RS08805	0.53	+1.0
2,204,355	+		CA265_RS08805	0.53	-0.2
2,204,397	+		CA265_RS08805	0.57	+1.5
2,204,398	-		CA265_RS08805	0.57	-0.2
2,204,506	-		CA265_RS08805	0.68	+0.0
2,204,518	+		CA265_RS08805	0.69	+2.4
2,204,522	+		CA265_RS08805	0.70	+1.6
2,204,523	-		CA265_RS08805	0.70	+0.7
2,204,552	-		CA265_RS08805	0.72	+0.9
2,204,552	-		CA265_RS08805	0.72	+0.2
2,204,614	-		CA265_RS08805	0.79	-0.6
2,204,637	-		CA265_RS08805	0.81	+1.3
2,204,678	+		CA265_RS08805	0.85	+1.9
2,204,692	-		CA265_RS08805	0.86	-0.9
2,204,787	+				+2.6