Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08785

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,198,164	+				-0.2
2,198,164	+				+0.2
2,198,164	+				+1.0
2,198,164	+				-0.5
2,198,165	-				-0.1
2,198,165	-				-1.3
2,198,186	+				-0.1
2,198,187	-				-3.2
2,198,250	+		CA265_RS08780	0.15	-0.8
2,198,276	-		CA265_RS08780	0.17	-1.1
2,198,289	+		CA265_RS08780	0.18	-0.1
2,198,289	+		CA265_RS08780	0.18	+0.6
2,198,293	+		CA265_RS08780	0.19	+0.1
2,198,293	+		CA265_RS08780	0.19	-0.4
2,198,338	-		CA265_RS08780	0.23	+0.4
2,198,338	-		CA265_RS08780	0.23	-3.0
2,198,343	+		CA265_RS08780	0.23	-0.6
2,198,344	-		CA265_RS08780	0.23	-0.7
2,198,389	-		CA265_RS08780	0.27	-1.5
2,198,390	+		CA265_RS08780	0.27	+0.4
2,198,394	+		CA265_RS08780	0.28	+0.8
2,198,430	-		CA265_RS08780	0.31	-1.1
2,198,445	+		CA265_RS08780	0.33	+1.1
2,198,456	-		CA265_RS08780	0.34	+1.8
2,198,467	-		CA265_RS08780	0.35	-1.4
2,198,479	+		CA265_RS08780	0.36	+0.7
2,198,480	-		CA265_RS08780	0.36	-1.0
2,198,499	+		CA265_RS08780	0.37	-0.2
2,198,500	-		CA265_RS08780	0.38	-1.9
2,198,500	-		CA265_RS08780	0.38	-3.0
2,198,502	-		CA265_RS08780	0.38	-0.4
2,198,544	+		CA265_RS08780	0.42	+0.2
2,198,581	+		CA265_RS08780	0.45	-0.6
2,198,583	+		CA265_RS08780	0.45	-0.2
2,198,607	+		CA265_RS08780	0.47	-1.4
2,198,608	-		CA265_RS08780	0.48	+0.0
2,198,613	-		CA265_RS08780	0.48	-0.5
2,198,613	-		CA265_RS08780	0.48	-1.3
2,198,617	+		CA265_RS08780	0.48	+0.8
2,198,618	-		CA265_RS08780	0.48	-1.5
2,198,637	+		CA265_RS08780	0.50	-1.0
2,198,641	+		CA265_RS08780	0.51	-1.4
2,198,677	+		CA265_RS08780	0.54	-0.6
2,198,680	+		CA265_RS08780	0.54	+1.1
2,198,681	-		CA265_RS08780	0.54	-1.6
2,198,685	-		CA265_RS08780	0.55	+0.4
2,198,685	-		CA265_RS08780	0.55	-0.4
2,198,688	+		CA265_RS08780	0.55	+1.0
2,198,691	+		CA265_RS08780	0.55	-0.0
2,198,714	-		CA265_RS08780	0.57	-1.2
2,198,755	-		CA265_RS08780	0.61	-1.6
2,198,807	-		CA265_RS08780	0.66	-1.7
2,198,829	-		CA265_RS08780	0.68	+0.6
2,198,898	+		CA265_RS08780	0.74	-0.7
2,198,916	-		CA265_RS08780	0.76	-1.6
2,198,919	-		CA265_RS08780	0.76	-3.3
2,198,919	-		CA265_RS08780	0.76	-2.4
2,198,927	-		CA265_RS08780	0.77	-0.7
2,198,937	+		CA265_RS08780	0.78	+0.1
2,198,937	+		CA265_RS08780	0.78	+0.6
2,198,966	-		CA265_RS08780	0.80	-1.6
2,199,003	+		CA265_RS08780	0.84	+0.3
2,199,018	+		CA265_RS08780	0.85	-0.7
2,199,023	-		CA265_RS08780	0.86	-0.2
2,199,027	+		CA265_RS08780	0.86	-0.9
2,199,051	-		CA265_RS08780	0.88	-0.7
2,199,082	-				-0.4
2,199,163	+				-1.5
2,199,163	+				-0.5
2,199,164	-				-0.5
2,199,232	-		CA265_RS08785	0.27	+0.4
2,199,304	-		CA265_RS08785	0.50	-1.1
2,199,304	-		CA265_RS08785	0.50	-1.4
2,199,465	-				-1.3
2,199,465	-				-1.5
2,199,473	-				-0.2
2,199,488	+				-0.3
2,199,585	-				-1.5
2,199,602	+				-0.6
2,199,616	+		CA265_RS08790	0.11	-1.0
2,199,694	+		CA265_RS08790	0.18	-0.5
2,199,788	+		CA265_RS08790	0.27	+1.8
2,199,815	-		CA265_RS08790	0.29	-1.9
2,199,830	+		CA265_RS08790	0.31	-0.3
2,199,862	+		CA265_RS08790	0.34	+0.4
2,199,863	-		CA265_RS08790	0.34	-1.8
2,199,870	-		CA265_RS08790	0.34	-0.4
2,199,871	+		CA265_RS08790	0.34	-0.3
2,199,915	-		CA265_RS08790	0.38	-2.4
2,199,954	-		CA265_RS08790	0.42	-2.0
2,199,975	-		CA265_RS08790	0.44	-0.2
2,200,017	+		CA265_RS08790	0.48	+1.3
2,200,048	-		CA265_RS08790	0.51	-1.8
2,200,048	-		CA265_RS08790	0.51	-2.1
2,200,081	-		CA265_RS08790	0.54	-1.3
2,200,155	-		CA265_RS08790	0.60	-0.5
2,200,172	+		CA265_RS08790	0.62	-1.1
2,200,172	+		CA265_RS08790	0.62	+0.2
2,200,173	-		CA265_RS08790	0.62	-1.7
2,200,184	+		CA265_RS08790	0.63	-0.1
2,200,185	-		CA265_RS08790	0.63	-1.1
2,200,270	-		CA265_RS08790	0.71	-3.6
2,200,281	-		CA265_RS08790	0.72	-1.1
2,200,348	+		CA265_RS08790	0.78	+0.0
2,200,398	-		CA265_RS08790	0.83	-1.3
2,200,398	-		CA265_RS08790	0.83	-1.7
2,200,411	+		CA265_RS08790	0.84	+0.6
2,200,411	+		CA265_RS08790	0.84	+0.9
2,200,419	-		CA265_RS08790	0.85	-0.9