Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08575

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,146,567	+		CA265_RS08565	0.88	+0.1
2,146,586	-		CA265_RS08565	0.90	-0.1
2,146,658	-				-0.8
2,146,691	-				+0.3
2,146,694	+				+0.2
2,146,695	-				-0.9
2,146,695	-				-0.3
2,146,752	-				+0.5
2,146,827	+				+1.4
2,146,827	+				-0.9
2,146,937	+				-1.2
2,147,256	-		CA265_RS08570	0.78	+0.4
2,147,277	+		CA265_RS08570	0.83	+0.4
2,147,366	+				-0.1
2,147,405	-				-0.2
2,147,408	+				-0.1
2,147,410	+				-0.4
2,147,411	-				+0.2
2,147,451	-				-1.9
2,147,520	-				-0.8
2,147,604	+				-0.6
2,147,694	-		CA265_RS08575	0.11	+0.1
2,147,755	-		CA265_RS08575	0.16	+0.5
2,147,791	-		CA265_RS08575	0.19	-0.2
2,147,791	-		CA265_RS08575	0.19	+0.5
2,147,791	-		CA265_RS08575	0.19	+0.3
2,147,791	-		CA265_RS08575	0.19	+0.1
2,147,841	-		CA265_RS08575	0.23	+0.1
2,147,869	+		CA265_RS08575	0.25	+0.0
2,147,869	+		CA265_RS08575	0.25	-0.1
2,147,870	-		CA265_RS08575	0.25	+0.6
2,147,870	-		CA265_RS08575	0.25	+0.7
2,147,871	+		CA265_RS08575	0.25	-1.0
2,147,942	-		CA265_RS08575	0.31	-0.8
2,148,023	+		CA265_RS08575	0.37	-0.4
2,148,024	-		CA265_RS08575	0.37	+0.2
2,148,044	+		CA265_RS08575	0.39	-0.1
2,148,054	-		CA265_RS08575	0.39	+0.3
2,148,151	+		CA265_RS08575	0.47	+0.4
2,148,179	+		CA265_RS08575	0.49	+1.8
2,148,182	+		CA265_RS08575	0.49	-0.1
2,148,182	+		CA265_RS08575	0.49	+0.1
2,148,246	+		CA265_RS08575	0.55	-0.6
2,148,277	-		CA265_RS08575	0.57	+0.0
2,148,284	+		CA265_RS08575	0.58	-1.0
2,148,420	-		CA265_RS08575	0.68	-0.4
2,148,467	+		CA265_RS08575	0.72	-0.2
2,148,468	-		CA265_RS08575	0.72	+0.4
2,148,477	+		CA265_RS08575	0.73	-1.0
2,148,530	+		CA265_RS08575	0.77	-0.0
2,148,530	+		CA265_RS08575	0.77	-1.6
2,148,548	-		CA265_RS08575	0.78	+0.2
2,148,557	-		CA265_RS08575	0.79	+0.1
2,148,557	-		CA265_RS08575	0.79	-0.5
2,148,573	-		CA265_RS08575	0.80	-0.4
2,148,621	-		CA265_RS08575	0.84	+0.2
2,148,621	-		CA265_RS08575	0.84	+0.1
2,148,628	-		CA265_RS08575	0.85	-0.4
2,148,719	+				+0.9
2,148,765	-				-0.4
2,148,805	-				-0.4
2,148,840	-				-0.0
2,148,851	-				-0.2
2,148,858	-				-0.7
2,148,859	+				-0.2
2,148,925	+				-0.9
2,148,957	-				-0.6
2,149,004	-				-0.5
2,149,015	-				-1.7
2,149,018	+				+0.3
2,149,018	+				+0.6
2,149,019	-				-0.2
2,149,025	+				+1.7
2,149,052	-				-0.4
2,149,052	-				-1.0
2,149,052	-				-0.2
2,149,206	-		CA265_RS08580	0.11	-0.4
2,149,245	-		CA265_RS08580	0.12	+0.8
2,149,245	-		CA265_RS08580	0.12	-0.1
2,149,245	-		CA265_RS08580	0.12	-0.0
2,149,290	+		CA265_RS08580	0.14	+0.1
2,149,295	+		CA265_RS08580	0.14	+0.3
2,149,329	-		CA265_RS08580	0.15	+0.2
2,149,341	-		CA265_RS08580	0.15	-0.3
2,149,341	-		CA265_RS08580	0.15	+0.6
2,149,402	+		CA265_RS08580	0.17	+0.2
2,149,406	+		CA265_RS08580	0.17	-0.2
2,149,449	+		CA265_RS08580	0.18	-0.2
2,149,458	+		CA265_RS08580	0.19	+0.3
2,149,490	+		CA265_RS08580	0.20	+0.8
2,149,490	+		CA265_RS08580	0.20	+1.2
2,149,491	-		CA265_RS08580	0.20	+2.0
2,149,500	-		CA265_RS08580	0.20	-0.1
2,149,519	-		CA265_RS08580	0.20	+0.0
2,149,519	-		CA265_RS08580	0.20	-0.1
2,149,638	-		CA265_RS08580	0.24	+0.1
2,149,794	-		CA265_RS08580	0.28	-0.2
2,149,816	+		CA265_RS08580	0.29	+1.4