Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08535

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,135,937	-		CA265_RS08530	0.64	-0.6
2,135,948	-		CA265_RS08530	0.64	-0.3
2,135,955	+		CA265_RS08530	0.64	-0.2
2,136,005	-		CA265_RS08530	0.66	-0.8
2,136,005	-		CA265_RS08530	0.66	+0.1
2,136,134	-		CA265_RS08530	0.71	-0.4
2,136,140	+		CA265_RS08530	0.71	+0.2
2,136,145	-		CA265_RS08530	0.71	+0.0
2,136,196	+		CA265_RS08530	0.73	+0.2
2,136,304	+		CA265_RS08530	0.77	+1.0
2,136,305	-		CA265_RS08530	0.77	+0.2
2,136,364	-		CA265_RS08530	0.79	+0.2
2,136,364	-		CA265_RS08530	0.79	-0.4
2,136,571	-		CA265_RS08530	0.87	-0.2
2,136,654	+		CA265_RS08530	0.90	+0.3
2,136,683	+				+0.4
2,136,699	-				+0.5
2,136,823	+				-1.3
2,136,823	+				-0.4
2,136,824	-				+0.2
2,136,841	+				+0.1
2,136,844	-				+0.0
2,136,910	+				+0.5
2,136,918	+				-0.5
2,136,929	-				+0.2
2,136,929	-				+0.8
2,137,055	+		CA265_RS08535	0.11	-0.5
2,137,055	+		CA265_RS08535	0.11	+0.5
2,137,056	-		CA265_RS08535	0.11	+1.3
2,137,056	-		CA265_RS08535	0.11	-0.3
2,137,060	-		CA265_RS08535	0.11	-1.6
2,137,085	+		CA265_RS08535	0.14	-0.3
2,137,112	+		CA265_RS08535	0.16	+0.3
2,137,119	-		CA265_RS08535	0.17	+0.3
2,137,138	-		CA265_RS08535	0.18	-0.6
2,137,223	+		CA265_RS08535	0.26	-1.3
2,137,223	+		CA265_RS08535	0.26	+0.2
2,137,278	+		CA265_RS08535	0.31	+0.6
2,137,278	+		CA265_RS08535	0.31	-1.5
2,137,279	-		CA265_RS08535	0.31	-0.2
2,137,281	-		CA265_RS08535	0.31	+0.4
2,137,321	+		CA265_RS08535	0.35	-0.2
2,137,322	-		CA265_RS08535	0.35	+0.4
2,137,322	-		CA265_RS08535	0.35	-0.8
2,137,337	+		CA265_RS08535	0.36	-0.6
2,137,338	-		CA265_RS08535	0.36	+0.4
2,137,354	-		CA265_RS08535	0.38	-0.2
2,137,385	-		CA265_RS08535	0.41	-0.9
2,137,410	+		CA265_RS08535	0.43	-0.7
2,137,413	-		CA265_RS08535	0.43	+0.2
2,137,413	-		CA265_RS08535	0.43	+0.4
2,137,433	-		CA265_RS08535	0.45	-1.3
2,137,469	-		CA265_RS08535	0.48	-0.6
2,137,489	+		CA265_RS08535	0.50	+0.2
2,137,490	-		CA265_RS08535	0.50	+0.1
2,137,490	-				+1.4
2,137,532	-		CA265_RS08535	0.54	-0.8
2,137,575	+		CA265_RS08535	0.58	+1.1
2,137,578	+		CA265_RS08535	0.58	+0.4
2,137,579	-		CA265_RS08535	0.58	+0.8
2,137,580	+		CA265_RS08535	0.58	-0.2
2,137,627	-		CA265_RS08535	0.62	-2.5
2,137,658	+		CA265_RS08535	0.65	+0.3
2,137,658	+		CA265_RS08535	0.65	+0.2
2,137,757	-		CA265_RS08535	0.74	-0.4
2,137,813	+		CA265_RS08535	0.79	-0.9
2,137,891	+		CA265_RS08535	0.86	+0.6
2,137,902	-		CA265_RS08535	0.87	+0.1
2,137,921	-		CA265_RS08535	0.89	-1.3
2,137,922	+		CA265_RS08535	0.89	-0.1
2,137,958	+				+0.0
2,138,018	-				+0.9
2,138,043	+				-3.3
2,138,054	+				+0.3
2,138,189	+				+0.4
2,138,244	+				+0.3
2,138,305	+				+0.0
2,138,305	+				+0.7
2,138,305	+				-0.8
2,138,314	-				-1.0
2,138,314	-				+0.6
2,138,316	+				+1.0
2,138,418	-				+1.0
2,138,463	+		CA265_RS08540	0.10	+0.3
2,138,469	-		CA265_RS08540	0.11	+0.5
2,138,492	+		CA265_RS08540	0.12	+0.6
2,138,497	-		CA265_RS08540	0.12	+0.9
2,138,527	+		CA265_RS08540	0.13	-0.1
2,138,551	+		CA265_RS08540	0.14	+0.1
2,138,605	-		CA265_RS08540	0.16	+0.1
2,138,605	-		CA265_RS08540	0.16	+0.8
2,138,651	-		CA265_RS08540	0.18	+0.2
2,138,679	-		CA265_RS08540	0.19	-1.2
2,138,737	-		CA265_RS08540	0.22	-0.0
2,138,739	+		CA265_RS08540	0.22	+1.4
2,138,741	+		CA265_RS08540	0.22	-0.1
2,138,799	+		CA265_RS08540	0.24	-0.0
2,138,800	-		CA265_RS08540	0.24	-0.6
2,138,854	-		CA265_RS08540	0.27	-1.4
2,138,857	+		CA265_RS08540	0.27	-0.9