Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08325

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,062,167	+				-0.9
2,062,242	+		CA265_RS08315	0.42	+0.1
2,062,298	-				-1.9
2,062,465	+				+0.3
2,062,484	+				-0.4
2,062,521	-				+0.2
2,062,593	+		CA265_RS08320	0.18	-0.1
2,062,663	-		CA265_RS08320	0.28	+0.4
2,062,686	-		CA265_RS08320	0.32	+0.2
2,062,844	+		CA265_RS08320	0.54	+0.4
2,062,850	-				+2.4
2,062,850	-		CA265_RS08320	0.55	-0.2
2,062,853	+		CA265_RS08320	0.56	+0.8
2,062,854	-		CA265_RS08320	0.56	+0.5
2,062,856	-		CA265_RS08320	0.56	+0.3
2,062,877	-		CA265_RS08320	0.59	+0.1
2,062,919	+		CA265_RS08320	0.65	-0.0
2,062,974	+		CA265_RS08320	0.73	+0.0
2,063,019	-		CA265_RS08320	0.79	-0.9
2,063,165	+				+0.4
2,063,170	+				+0.2
2,063,184	+				-1.2
2,063,185	-				+0.5
2,063,207	+				+0.0
2,063,213	-				+0.1
2,063,213	-				+1.6
2,063,263	+		CA265_RS08325	0.15	+0.4
2,063,299	+		CA265_RS08325	0.20	+0.1
2,063,347	-		CA265_RS08325	0.27	-0.8
2,063,442	+		CA265_RS08325	0.41	-0.2
2,063,473	-		CA265_RS08325	0.46	+2.2
2,063,604	+		CA265_RS08325	0.65	-0.4
2,063,604	+		CA265_RS08325	0.65	+0.6
2,063,618	-		CA265_RS08325	0.68	+0.8
2,063,637	+		CA265_RS08325	0.70	-0.4
2,063,681	+		CA265_RS08325	0.77	+0.1
2,063,742	+		CA265_RS08325	0.86	-0.8
2,063,742	+		CA265_RS08325	0.86	+0.3
2,063,744	+		CA265_RS08325	0.86	+1.2
2,063,757	+		CA265_RS08325	0.88	+1.4
2,063,762	+		CA265_RS08325	0.89	-0.3
2,063,830	-				+0.5
2,063,850	-				+0.3
2,063,904	+				+0.3
2,063,968	-				+0.6
2,063,990	+				+1.1
2,064,162	+				+0.6
2,064,187	-				-0.3
2,064,251	-		CA265_RS08330	0.11	+2.1
2,064,288	+		CA265_RS08330	0.14	+0.0
2,064,289	-		CA265_RS08330	0.14	-0.0
2,064,405	+		CA265_RS08330	0.24	-0.1
2,064,514	-		CA265_RS08330	0.34	-0.6
2,064,518	+		CA265_RS08330	0.34	+1.1
2,064,526	-		CA265_RS08330	0.35	+0.8
2,064,597	-		CA265_RS08330	0.41	+0.5
2,064,622	+		CA265_RS08330	0.43	+1.1
2,064,674	+		CA265_RS08330	0.47	+1.2
2,064,674	+		CA265_RS08330	0.47	-0.1
2,064,675	-		CA265_RS08330	0.48	-0.4
2,064,716	-		CA265_RS08330	0.51	+1.7
2,064,726	+		CA265_RS08330	0.52	+0.3
2,064,727	-		CA265_RS08330	0.52	-0.1
2,064,766	+		CA265_RS08330	0.55	-0.1