Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08115

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,013,365	+		CA265_RS08105	0.21	+0.4
2,013,397	-		CA265_RS08105	0.29	-2.2
2,013,467	-		CA265_RS08105	0.47	+0.6
2,013,551	-		CA265_RS08105	0.68	-0.1
2,013,551	-		CA265_RS08105	0.68	-2.1
2,013,554	-		CA265_RS08105	0.69	-1.0
2,013,554	-		CA265_RS08105	0.69	-1.4
2,013,581	+		CA265_RS08105	0.76	+0.7
2,013,587	+		CA265_RS08105	0.77	-0.2
2,013,631	+		CA265_RS08105	0.89	+0.5
2,013,631	+		CA265_RS08105	0.89	+1.0
2,013,653	-				-0.0
2,013,681	+				-0.6
2,013,683	+				-0.3
2,013,684	-				-0.2
2,013,687	+				+0.4
2,013,731	+				+0.2
2,013,732	-				+0.6
2,013,753	+				-0.3
2,013,753	+				-0.9
2,013,755	+				-0.1
2,013,757	-				-0.6
2,013,802	-		CA265_RS08110	0.14	+0.5
2,013,988	-		CA265_RS08110	0.49	+0.9
2,014,143	+		CA265_RS08110	0.79	+1.0
2,014,145	+		CA265_RS08110	0.79	+0.4
2,014,176	+		CA265_RS08110	0.85	-0.4
2,014,225	-				-0.3
2,014,299	+				+0.8
2,014,392	+				-0.5
2,014,401	+				+0.8
2,014,404	-		CA265_RS08115	0.10	+0.6
2,014,507	-		CA265_RS08115	0.33	+0.7
2,014,552	+		CA265_RS08115	0.42	+2.3
2,014,604	+		CA265_RS08115	0.54	-0.1
2,014,639	+		CA265_RS08115	0.61	-0.8
2,014,640	-		CA265_RS08115	0.61	+1.1
2,014,641	+		CA265_RS08115	0.62	+1.3
2,014,663	-		CA265_RS08115	0.66	-0.1
2,014,702	+		CA265_RS08115	0.75	+0.6
2,014,706	-		CA265_RS08115	0.76	+0.1
2,014,779	+				-0.3
2,014,794	-				-1.0
2,014,795	+				+1.2
2,014,850	-				-0.7
2,014,884	-				-0.7
2,015,064	+				-0.2
2,015,084	-				-0.2
2,015,091	+				+0.2
2,015,241	+				-1.6
2,015,291	+				-1.1
2,015,292	-				-0.2
2,015,303	-		CA265_RS08120	0.11	-0.5
2,015,303	-		CA265_RS08120	0.11	-0.9
2,015,303	-		CA265_RS08120	0.11	-0.9
2,015,305	-		CA265_RS08120	0.11	-1.1
2,015,443	-		CA265_RS08120	0.30	-0.5
2,015,448	+		CA265_RS08120	0.30	+0.0
2,015,531	-		CA265_RS08120	0.41	-1.9
2,015,531	-		CA265_RS08120	0.41	-0.8
2,015,554	+		CA265_RS08120	0.44	-1.7
2,015,555	-		CA265_RS08120	0.45	-0.6
2,015,589	+		CA265_RS08120	0.49	-0.6
2,015,611	+		CA265_RS08120	0.52	-1.3
2,015,611	+		CA265_RS08120	0.52	-1.2
2,015,612	-		CA265_RS08120	0.52	-0.3
2,015,691	+		CA265_RS08120	0.63	-0.5
2,015,710	+		CA265_RS08120	0.65	-1.1
2,015,791	+		CA265_RS08120	0.76	-1.0
2,015,791	+		CA265_RS08120	0.76	-1.0
2,015,791	+		CA265_RS08120	0.76	-0.7
2,015,791	+		CA265_RS08120	0.76	-0.2
2,015,793	+		CA265_RS08120	0.76	-0.5
2,015,793	+		CA265_RS08120	0.76	-1.6
2,015,812	-		CA265_RS08120	0.79	-0.6