Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08030

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,999,276	+		CA265_RS08020	0.15	+0.2
1,999,398	+		CA265_RS08020	0.37	-0.6
1,999,399	-		CA265_RS08020	0.37	+1.0
1,999,399	-		CA265_RS08020	0.37	-0.4
1,999,400	+		CA265_RS08020	0.37	-2.3
1,999,448	+		CA265_RS08020	0.46	+0.8
1,999,471	-		CA265_RS08020	0.50	+1.1
1,999,498	-		CA265_RS08020	0.55	+0.3
1,999,502	+		CA265_RS08020	0.55	-1.2
1,999,628	+		CA265_RS08020	0.78	+0.5
1,999,643	-		CA265_RS08020	0.81	-0.3
1,999,662	+		CA265_RS08020	0.84	-0.4
1,999,717	-				+0.0
1,999,765	-				+0.6
1,999,767	+				-0.6
1,999,778	-				+1.2
1,999,781	-				+0.8
1,999,802	+				+0.3
1,999,802	+				+0.8
1,999,802	+				-0.6
1,999,803	-				+0.4
1,999,803	-				+0.9
1,999,804	+				-2.3
1,999,841	+		CA265_RS08025	0.17	-0.6
1,999,850	+		CA265_RS08025	0.20	+1.2
1,999,850	+		CA265_RS08025	0.20	-1.3
1,999,851	-		CA265_RS08025	0.20	-0.5
1,999,985	-		CA265_RS08025	0.65	-0.9
1,999,991	-		CA265_RS08025	0.67	-0.0
1,999,991	-		CA265_RS08025	0.67	-0.4
2,000,018	-		CA265_RS08025	0.76	-0.6
2,000,105	+				-0.5
2,000,180	-				-0.1
2,000,183	-				+1.3
2,000,183	-				+0.1
2,000,193	+				+0.4
2,000,193	+				+0.2
2,000,194	-				-0.1
2,000,195	+				+1.2
2,000,196	-				+0.4
2,000,225	-				+0.9
2,000,240	+				+0.7
2,000,320	-				-0.5
2,000,320	-				-0.9
2,000,372	+		CA265_RS08030	0.15	+0.3
2,000,404	+		CA265_RS08030	0.18	-1.3
2,000,420	-		CA265_RS08030	0.20	+0.4
2,000,420	-		CA265_RS08030	0.20	+2.7
2,000,492	+		CA265_RS08030	0.27	+0.4
2,000,545	+		CA265_RS08030	0.32	-0.5
2,000,574	-		CA265_RS08030	0.35	+0.1
2,000,631	+		CA265_RS08030	0.41	+0.8
2,000,693	+		CA265_RS08030	0.47	-0.2
2,000,698	-		CA265_RS08030	0.47	-0.6
2,000,698	-		CA265_RS08030	0.47	-0.0
2,000,746	-		CA265_RS08030	0.52	+0.5
2,000,765	+		CA265_RS08030	0.54	+0.8
2,000,766	-		CA265_RS08030	0.54	-0.6
2,000,877	-		CA265_RS08030	0.65	+0.7
2,000,893	-		CA265_RS08030	0.66	-1.1
2,000,936	+		CA265_RS08030	0.71	+2.0
2,000,937	-		CA265_RS08030	0.71	-0.3
2,000,965	+		CA265_RS08030	0.73	+1.2
2,001,015	+		CA265_RS08030	0.78	+0.6
2,001,066	-		CA265_RS08030	0.83	+0.5
2,001,072	-		CA265_RS08030	0.84	+0.6
2,001,072	-		CA265_RS08030	0.84	+1.2
2,001,077	+		CA265_RS08030	0.85	-1.0
2,001,251	-				-0.3
2,001,253	-				+0.0
2,001,271	-				-1.4
2,001,347	+				+1.4
2,001,453	+		CA265_RS08035	0.12	-0.1
2,001,455	+		CA265_RS08035	0.12	-0.7
2,001,509	+		CA265_RS08035	0.18	-1.8
2,001,603	+		CA265_RS08035	0.29	-0.6
2,001,604	-		CA265_RS08035	0.30	-0.2
2,001,605	+		CA265_RS08035	0.30	-0.0
2,001,654	-		CA265_RS08035	0.35	+0.2
2,001,689	-		CA265_RS08035	0.40	-0.4
2,001,754	+		CA265_RS08035	0.47	+1.1
2,001,756	+		CA265_RS08035	0.48	+0.5
2,001,757	-		CA265_RS08035	0.48	+1.8
2,001,770	+		CA265_RS08035	0.49	-0.4
2,001,773	-		CA265_RS08035	0.50	-0.2
2,001,783	+		CA265_RS08035	0.51	-0.4
2,001,799	-		CA265_RS08035	0.53	-0.2
2,001,888	+		CA265_RS08035	0.63	+0.5
2,001,910	+		CA265_RS08035	0.66	+0.0
2,001,961	+		CA265_RS08035	0.72	-1.0
2,002,022	+		CA265_RS08035	0.79	+2.0
2,002,023	-		CA265_RS08035	0.79	+0.1
2,002,023	-		CA265_RS08035	0.79	-0.5
2,002,025	-		CA265_RS08035	0.80	+0.4
2,002,049	-		CA265_RS08035	0.82	-0.5
2,002,198	+				+0.4
2,002,198	+				+0.5
2,002,227	+				-0.2
2,002,227	+				-1.2
2,002,227	+				+0.8
2,002,228	-				-1.2