Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07530

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,895,482	+		CA265_RS07520	0.47	-0.0
1,895,513	+		CA265_RS07520	0.50	+0.6
1,895,532	+		CA265_RS07520	0.52	+0.5
1,895,533	-		CA265_RS07520	0.52	+0.4
1,895,552	+		CA265_RS07520	0.54	-0.4
1,895,553	-		CA265_RS07520	0.54	-0.3
1,895,575	+		CA265_RS07520	0.56	-0.6
1,895,596	-		CA265_RS07520	0.58	-0.8
1,895,729	-		CA265_RS07520	0.72	-0.5
1,895,748	-		CA265_RS07520	0.73	-0.4
1,895,855	+		CA265_RS07520	0.84	-0.5
1,895,904	+		CA265_RS07520	0.89	+1.1
1,895,967	-				+1.0
1,895,970	-				-0.2
1,896,007	+				+1.0
1,896,007	+				-0.3
1,896,030	+				-1.2
1,896,030	+				-0.9
1,896,043	+		CA265_RS07525	0.10	+0.5
1,896,075	-		CA265_RS07525	0.17	+0.5
1,896,075	-		CA265_RS07525	0.17	+0.2
1,896,187	-		CA265_RS07525	0.42	+0.4
1,896,187	-		CA265_RS07525	0.42	-0.3
1,896,187	-		CA265_RS07525	0.42	+0.1
1,896,198	-		CA265_RS07525	0.45	-0.0
1,896,198	-		CA265_RS07525	0.45	+0.5
1,896,199	+		CA265_RS07525	0.45	+0.7
1,896,202	+		CA265_RS07525	0.45	-0.2
1,896,254	+		CA265_RS07525	0.57	+0.2
1,896,254	+		CA265_RS07525	0.57	+0.3
1,896,254	+		CA265_RS07525	0.57	+0.4
1,896,255	-		CA265_RS07525	0.57	-0.4
1,896,282	+		CA265_RS07525	0.63	-0.6
1,896,302	-		CA265_RS07525	0.68	-1.0
1,896,369	+		CA265_RS07525	0.82	+0.2
1,896,373	+		CA265_RS07525	0.83	-0.5
1,896,446	+				-1.2
1,896,504	-				+0.2
1,896,524	+				+0.0
1,896,525	-				-0.9
1,896,596	-		CA265_RS07530	0.11	-0.9
1,896,624	+		CA265_RS07530	0.13	-0.3
1,896,625	-		CA265_RS07530	0.13	+0.6
1,896,655	-		CA265_RS07530	0.15	-0.3
1,896,655	-		CA265_RS07530	0.15	-0.6
1,896,679	-		CA265_RS07530	0.17	-0.1
1,896,758	+		CA265_RS07530	0.23	-1.7
1,896,759	-		CA265_RS07530	0.23	-0.2
1,896,919	+		CA265_RS07530	0.35	+0.1
1,897,033	-		CA265_RS07530	0.44	+0.2
1,897,138	+		CA265_RS07530	0.52	-0.1
1,897,182	-		CA265_RS07530	0.56	+1.4
1,897,185	+		CA265_RS07530	0.56	+0.3
1,897,200	-		CA265_RS07530	0.57	+0.7
1,897,228	+		CA265_RS07530	0.59	+0.1
1,897,228	+		CA265_RS07530	0.59	-0.9
1,897,252	-		CA265_RS07530	0.61	+0.0
1,897,252	-		CA265_RS07530	0.61	+0.9
1,897,437	+		CA265_RS07530	0.75	-0.5
1,897,513	-		CA265_RS07530	0.81	+0.4
1,897,599	-		CA265_RS07530	0.88	-0.1
1,897,602	+		CA265_RS07530	0.88	+1.3
1,897,649	+				+1.0
1,897,650	-				-0.4
1,897,717	+				+0.7
1,897,723	+				-0.0
1,897,724	-				-0.8
1,897,756	+				-0.7
1,897,756	+				+0.9
1,897,757	-				-0.9
1,897,757	-				+1.4
1,897,757	-				-0.1
1,897,761	-				-0.1
1,897,761	-				-0.7
1,897,761	-				+0.7
1,897,777	+				+0.5
1,897,816	-				+0.8
1,897,892	+		CA265_RS07535	0.11	-0.7
1,898,013	+				+3.4
1,898,042	+		CA265_RS07535	0.45	-0.7
1,898,105	+		CA265_RS07535	0.60	-0.5
1,898,106	-		CA265_RS07535	0.60	+0.6
1,898,262	+				+0.6
1,898,262	+				-0.4
1,898,329	-		CA265_RS07540	0.14	+0.3
1,898,402	+		CA265_RS07540	0.37	-0.5
1,898,403	-		CA265_RS07540	0.38	+0.4
1,898,403	-		CA265_RS07540	0.38	-0.2
1,898,403	-		CA265_RS07540	0.38	-0.8
1,898,528	+		CA265_RS07540	0.77	-0.0
1,898,564	+		CA265_RS07540	0.88	-1.2
1,898,640	-				-0.1
1,898,683	-				-0.1
1,898,694	+				+0.4
1,898,695	-				+0.5
1,898,717	+				-0.8