Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06955

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,727,770	+		CA265_RS06950	0.48	+0.7
1,727,770	+		CA265_RS06950	0.48	-0.1
1,727,772	+		CA265_RS06950	0.49	-0.9
1,727,921	+		CA265_RS06950	0.64	+0.0
1,727,980	+		CA265_RS06950	0.70	+0.4
1,728,002	-		CA265_RS06950	0.72	-0.1
1,728,084	+		CA265_RS06950	0.80	+0.5
1,728,085	-		CA265_RS06950	0.80	+1.2
1,728,085	-		CA265_RS06950	0.80	+0.2
1,728,089	-		CA265_RS06950	0.81	+0.5
1,728,095	+		CA265_RS06950	0.81	-0.6
1,728,137	+		CA265_RS06950	0.85	-0.8
1,728,164	+		CA265_RS06950	0.88	-0.3
1,728,165	-		CA265_RS06950	0.88	-0.4
1,728,239	+				+0.6
1,728,240	-				-1.0
1,728,336	+				+0.0
1,728,343	+				-0.3
1,728,346	-				+0.9
1,728,452	+				-0.5
1,728,481	-				+0.7
1,728,556	-				-0.4
1,728,673	+				+1.1
1,728,766	+				+0.4
1,728,795	+		CA265_RS06955	0.10	-0.8
1,728,852	-		CA265_RS06955	0.15	-0.0
1,728,852	-		CA265_RS06955	0.15	-0.2
1,728,853	+		CA265_RS06955	0.15	+0.3
1,728,854	-		CA265_RS06955	0.15	+0.7
1,728,896	+		CA265_RS06955	0.19	-0.1
1,728,918	+		CA265_RS06955	0.21	+0.7
1,728,919	-		CA265_RS06955	0.21	-0.6
1,728,946	-		CA265_RS06955	0.23	+0.8
1,729,019	-		CA265_RS06955	0.29	+1.1
1,729,057	+		CA265_RS06955	0.33	-0.2
1,729,077	-		CA265_RS06955	0.34	-0.4
1,729,137	-		CA265_RS06955	0.39	-0.5
1,729,169	-		CA265_RS06955	0.42	-0.8
1,729,188	-		CA265_RS06955	0.44	+0.8
1,729,188	-		CA265_RS06955	0.44	-0.7
1,729,191	+		CA265_RS06955	0.44	-0.3
1,729,235	-		CA265_RS06955	0.48	+0.5
1,729,240	-		CA265_RS06955	0.48	-0.3
1,729,244	+		CA265_RS06955	0.49	-0.3
1,729,245	-		CA265_RS06955	0.49	-0.4
1,729,246	+		CA265_RS06955	0.49	+0.5
1,729,280	+		CA265_RS06955	0.52	+0.2
1,729,281	-		CA265_RS06955	0.52	-0.5
1,729,336	+		CA265_RS06955	0.56	+0.7
1,729,400	+		CA265_RS06955	0.62	+1.1
1,729,402	+		CA265_RS06955	0.62	+1.0
1,729,418	-		CA265_RS06955	0.63	+0.0
1,729,418	-		CA265_RS06955	0.63	+0.2
1,729,499	-		CA265_RS06955	0.70	-0.3
1,729,546	+		CA265_RS06955	0.74	+0.1
1,729,547	-		CA265_RS06955	0.74	-0.5
1,729,550	+		CA265_RS06955	0.75	-0.5
1,729,551	-		CA265_RS06955	0.75	-0.1
1,729,551	-		CA265_RS06955	0.75	-0.7
1,729,634	+		CA265_RS06955	0.82	+1.3
1,729,634	+		CA265_RS06955	0.82	+0.3
1,729,634	+		CA265_RS06955	0.82	+0.0
1,729,697	-		CA265_RS06955	0.87	+1.1
1,729,828	-				+0.3
1,729,865	+				+0.2
1,729,950	+				+0.1
1,729,968	-				-0.2
1,729,969	+				-0.6
1,729,980	+				+0.7
1,730,171	+		CA265_RS06960	0.38	+0.5
1,730,236	+		CA265_RS06960	0.48	+1.4
1,730,436	+		CA265_RS06960	0.78	+1.0
1,730,436	+		CA265_RS06960	0.78	+1.1
1,730,465	+		CA265_RS06960	0.82	-0.5
1,730,465	+		CA265_RS06960	0.82	+0.2
1,730,465	+		CA265_RS06960	0.82	+1.1
1,730,466	-		CA265_RS06960	0.82	+2.6
1,730,466	-		CA265_RS06960	0.82	+0.2
1,730,477	+		CA265_RS06960	0.84	+0.7
1,730,478	-		CA265_RS06960	0.84	-0.3
1,730,488	+		CA265_RS06960	0.85	-0.0
1,730,616	+				+1.4
1,730,617	-				-0.7
1,730,617	-				-0.7
1,730,627	-				-0.3
1,730,732	+				+0.6
1,730,734	+				-0.1
1,730,761	+				-0.3
1,730,770	-				+0.1
1,730,804	-				+1.0