Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06880

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,711,163	-		CA265_RS06875	0.71	-1.7
1,711,168	-		CA265_RS06875	0.71	-0.2
1,711,186	+		CA265_RS06875	0.72	-1.8
1,711,187	-		CA265_RS06875	0.72	-2.5
1,711,211	+		CA265_RS06875	0.72	+0.8
1,711,230	+		CA265_RS06875	0.73	-0.5
1,711,274	-		CA265_RS06875	0.74	-2.8
1,711,366	+		CA265_RS06875	0.77	-1.2
1,711,382	+		CA265_RS06875	0.78	-0.9
1,711,382	+		CA265_RS06875	0.78	+0.3
1,711,540	+		CA265_RS06875	0.83	+2.3
1,711,540	+		CA265_RS06875	0.83	-2.1
1,711,545	-		CA265_RS06875	0.83	-4.0
1,711,547	-		CA265_RS06875	0.83	-0.4
1,711,564	-		CA265_RS06875	0.84	-1.5
1,711,731	+		CA265_RS06875	0.89	-0.7
1,711,845	+				-2.2
1,711,864	+				+1.2
1,711,865	-				-1.5
1,711,994	+				-0.8
1,711,995	-				-1.0
1,712,071	-				-1.0
1,712,074	-				-1.1
1,712,093	+				+0.3
1,712,097	+				-0.7
1,712,113	+				-1.3
1,712,134	-				-0.3
1,712,135	+				+0.2
1,712,218	+				+0.3
1,712,219	-				-1.1
1,712,313	-		CA265_RS06880	0.16	-1.4
1,712,489	-		CA265_RS06880	0.29	-2.9
1,712,502	-		CA265_RS06880	0.29	-1.3
1,712,570	+		CA265_RS06880	0.34	-1.7
1,712,570	+		CA265_RS06880	0.34	+0.1
1,712,571	-		CA265_RS06880	0.34	-1.9
1,712,572	+		CA265_RS06880	0.34	-0.7
1,712,572	+		CA265_RS06880	0.34	-0.9
1,712,572	+		CA265_RS06880	0.34	-1.5
1,712,593	+		CA265_RS06880	0.36	-0.2
1,712,594	-		CA265_RS06880	0.36	-1.1
1,712,594	-		CA265_RS06880	0.36	-0.3
1,712,615	-		CA265_RS06880	0.37	-1.4
1,712,794	+		CA265_RS06880	0.50	-0.5
1,712,795	-				+1.3
1,712,866	+		CA265_RS06880	0.55	-0.8
1,712,888	+		CA265_RS06880	0.56	-1.2
1,712,944	+		CA265_RS06880	0.60	-1.6
1,712,978	+		CA265_RS06880	0.63	-1.1
1,713,013	+		CA265_RS06880	0.65	-1.4
1,713,020	+		CA265_RS06880	0.66	-1.9
1,713,057	-		CA265_RS06880	0.68	-0.7
1,713,068	+		CA265_RS06880	0.69	-3.4
1,713,068	+		CA265_RS06880	0.69	-2.5
1,713,069	-		CA265_RS06880	0.69	-2.7
1,713,097	-		CA265_RS06880	0.71	-1.6
1,713,126	+		CA265_RS06880	0.73	-0.5
1,713,176	+		CA265_RS06880	0.76	-0.5
1,713,187	-		CA265_RS06880	0.77	-1.2
1,713,190	+		CA265_RS06880	0.77	-0.9
1,713,223	-		CA265_RS06880	0.80	-1.8
1,713,256	+		CA265_RS06880	0.82	-0.9
1,713,257	-		CA265_RS06880	0.82	-0.9
1,713,257	-		CA265_RS06880	0.82	-1.5
1,713,303	+		CA265_RS06880	0.85	-0.5
1,713,335	-		CA265_RS06880	0.88	-1.8
1,713,369	-				+2.3
1,713,397	+				-1.4
1,713,397	+				-0.4
1,713,398	-				-0.2
1,713,398	-				-1.6
1,713,434	-				-0.1
1,713,434	-				-3.1
1,713,538	-				-1.4
1,713,558	+				-1.1
1,713,590	-				-0.5
1,713,590	-				-0.5
1,713,611	-				-2.0
1,713,684	-				-0.8
1,713,723	+				-0.5
1,713,724	-				-2.7
1,713,724	-				-1.8
1,713,800	-				-0.5
1,713,824	+				+0.4
1,713,836	-				-0.6
1,713,836	-				+0.5
1,713,942	-				-2.8
1,713,947	+				-1.8
1,713,970	+				+0.2
1,714,014	+		CA265_RS06885	0.13	+0.2
1,714,056	-		CA265_RS06885	0.25	-1.2
1,714,119	+		CA265_RS06885	0.43	-0.5
1,714,292	+				+0.3
1,714,420	+				+1.2
1,714,498	-				-0.2
1,714,510	+				+0.7