Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06785

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,677,299	-		CA265_RS06780	0.78	-0.0
1,677,388	+		CA265_RS06780	0.80	-1.8
1,677,389	-		CA265_RS06780	0.80	+0.1
1,677,404	+		CA265_RS06780	0.80	-1.0
1,677,443	+		CA265_RS06780	0.81	+0.3
1,677,443	+		CA265_RS06780	0.81	-2.2
1,677,444	-		CA265_RS06780	0.81	-0.5
1,677,444	-		CA265_RS06780	0.81	+0.0
1,677,506	+		CA265_RS06780	0.83	-0.3
1,677,506	+		CA265_RS06780	0.83	-1.2
1,677,506	+		CA265_RS06780	0.83	+0.8
1,677,506	+		CA265_RS06780	0.83	-0.7
1,677,506	+		CA265_RS06780	0.83	-1.7
1,677,506	+		CA265_RS06780	0.83	-0.5
1,677,507	-		CA265_RS06780	0.83	-2.2
1,677,511	-		CA265_RS06780	0.83	+0.8
1,677,511	-		CA265_RS06780	0.83	-0.2
1,677,520	+		CA265_RS06780	0.83	-0.8
1,677,539	-		CA265_RS06780	0.84	+0.2
1,677,554	-		CA265_RS06780	0.84	+0.1
1,677,592	+		CA265_RS06780	0.85	+0.0
1,677,593	-		CA265_RS06780	0.85	-1.1
1,677,593	-		CA265_RS06780	0.85	+0.1
1,677,660	-		CA265_RS06780	0.87	+1.0
1,677,707	-		CA265_RS06780	0.88	-0.2
1,677,734	-		CA265_RS06780	0.89	-0.4
1,677,735	+		CA265_RS06780	0.89	-2.2
1,677,740	+		CA265_RS06780	0.89	-0.4
1,677,819	+				-1.2
1,677,833	+				-0.5
1,677,834	-				-0.2
1,677,932	+				-1.7
1,678,009	+				-1.1
1,678,013	+				+0.5
1,678,013	+				-0.7
1,678,014	-				+0.1
1,678,074	-				+2.3
1,678,126	-				-1.6
1,678,173	+				+0.0
1,678,192	-				+0.6
1,678,375	-				-0.1
1,678,382	+				-0.5
1,678,399	-				+0.0
1,678,414	-				+0.3
1,678,424	-				-0.3
1,678,424	-				-0.6
1,678,426	-				-0.2
1,678,435	-				-0.2
1,678,479	-		CA265_RS06785	0.13	-0.8
1,678,509	-		CA265_RS06785	0.14	-0.8
1,678,587	+		CA265_RS06785	0.20	-3.9
1,678,638	-		CA265_RS06785	0.23	-0.0
1,678,705	-		CA265_RS06785	0.27	-1.3
1,678,730	-		CA265_RS06785	0.29	+1.2
1,678,730	-		CA265_RS06785	0.29	-0.1
1,678,819	-		CA265_RS06785	0.35	-0.1
1,678,917	+		CA265_RS06785	0.41	-2.6
1,678,983	+		CA265_RS06785	0.45	-2.6
1,678,983	+		CA265_RS06785	0.45	-1.7
1,678,988	-		CA265_RS06785	0.46	+0.9
1,679,059	+		CA265_RS06785	0.50	-1.1
1,679,060	-		CA265_RS06785	0.50	-1.2
1,679,082	+		CA265_RS06785	0.52	-3.5
1,679,227	-		CA265_RS06785	0.61	-0.2
1,679,233	-		CA265_RS06785	0.61	-0.2
1,679,240	+		CA265_RS06785	0.62	+0.3
1,679,386	+		CA265_RS06785	0.71	-1.9
1,679,387	-		CA265_RS06785	0.71	-1.0
1,679,387	-		CA265_RS06785	0.71	+1.2
1,679,409	-		CA265_RS06785	0.73	-0.4
1,679,460	-		CA265_RS06785	0.76	-0.8
1,679,506	-		CA265_RS06785	0.79	-0.6
1,679,618	+		CA265_RS06785	0.86	-1.8
1,679,619	-		CA265_RS06785	0.86	+0.8
1,679,670	+		CA265_RS06785	0.90	+0.0
1,679,703	+				-2.1
1,679,704	-				+1.1
1,679,755	+				-1.7
1,679,821	+				-1.6
1,679,821	+				-1.9
1,679,842	+				-0.8
1,679,843	-				-0.0
1,679,961	-				-0.2
1,679,988	+				-0.8
1,680,145	+		CA265_RS06790	0.13	+0.1
1,680,145	+		CA265_RS06790	0.13	-0.6
1,680,146	-		CA265_RS06790	0.13	+0.2
1,680,185	+		CA265_RS06790	0.15	-0.5
1,680,185	+		CA265_RS06790	0.15	-0.8
1,680,298	-		CA265_RS06790	0.20	-0.0
1,680,372	+		CA265_RS06790	0.24	-0.2
1,680,408	-		CA265_RS06790	0.25	-0.4
1,680,408	-		CA265_RS06790	0.25	+0.5
1,680,414	-		CA265_RS06790	0.26	+0.4
1,680,529	+		CA265_RS06790	0.31	-0.7
1,680,572	-		CA265_RS06790	0.33	+0.2
1,680,572	-		CA265_RS06790	0.33	-0.9
1,680,614	-		CA265_RS06790	0.35	+0.8
1,680,614	-		CA265_RS06790	0.35	-0.0
1,680,614	-		CA265_RS06790	0.35	-0.5
1,680,631	+		CA265_RS06790	0.36	-1.5
1,680,681	+		CA265_RS06790	0.38	-1.1
1,680,682	-		CA265_RS06790	0.38	+1.6
1,680,682	-		CA265_RS06790	0.38	-0.8
1,680,682	-		CA265_RS06790	0.38	-0.0
1,680,698	+		CA265_RS06790	0.39	-1.8
1,680,710	-		CA265_RS06790	0.40	+0.2
1,680,750	+		CA265_RS06790	0.42	-0.9