Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06570

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,623,256	-				-1.3
1,623,261	-				-1.3
1,623,261	-				+0.3
1,623,276	-				-0.6
1,623,276	-				-0.3
1,623,321	-				-0.2
1,623,392	+				+0.0
1,623,409	+				-0.8
1,623,535	-				-0.9
1,623,535	-				+0.1
1,623,600	+				+3.0
1,623,600	+				-0.0
1,623,601	-				-1.2
1,623,601	-				-0.0
1,623,601	-				-1.5
1,623,601	-				-1.8
1,623,693	-				-1.1
1,623,693	-				+0.1
1,623,821	-				-0.3
1,623,843	+				-0.3
1,623,950	+				-0.9
1,623,999	+				-1.9
1,624,055	-				+0.4
1,624,107	+		CA265_RS06570	0.17	-0.3
1,624,154	-		CA265_RS06570	0.20	-0.1
1,624,159	+		CA265_RS06570	0.20	-0.7
1,624,159	+		CA265_RS06570	0.20	-1.0
1,624,159	+		CA265_RS06570	0.20	-1.8
1,624,174	-		CA265_RS06570	0.21	-1.3
1,624,178	-		CA265_RS06570	0.22	-2.2
1,624,191	+		CA265_RS06570	0.22	-0.5
1,624,195	-		CA265_RS06570	0.23	-0.3
1,624,469	-		CA265_RS06570	0.41	-0.2
1,624,488	-		CA265_RS06570	0.42	-1.5
1,624,522	-		CA265_RS06570	0.45	+0.2
1,624,522	-		CA265_RS06570	0.45	-1.4
1,624,569	-		CA265_RS06570	0.48	-0.6
1,624,581	+		CA265_RS06570	0.49	-0.2
1,624,595	+		CA265_RS06570	0.50	-1.5
1,624,595	+		CA265_RS06570	0.50	-0.1
1,624,596	-				+1.4
1,624,604	+		CA265_RS06570	0.50	-1.5
1,624,635	+		CA265_RS06570	0.52	-0.7
1,624,636	-		CA265_RS06570	0.52	-2.0
1,624,637	+		CA265_RS06570	0.52	-0.8
1,624,637	+		CA265_RS06570	0.52	-1.2
1,624,638	-		CA265_RS06570	0.53	-1.8
1,624,666	+		CA265_RS06570	0.54	-1.7
1,624,823	+		CA265_RS06570	0.65	-1.9
1,624,838	+		CA265_RS06570	0.66	-0.9
1,624,839	-		CA265_RS06570	0.66	-1.6
1,624,886	+		CA265_RS06570	0.69	-1.2
1,624,886	+		CA265_RS06570	0.69	-0.4
1,624,984	-		CA265_RS06570	0.76	-0.0
1,624,995	+		CA265_RS06570	0.77	-1.1
1,625,003	-		CA265_RS06570	0.77	-1.5
1,625,007	-		CA265_RS06570	0.77	-1.7
1,625,033	-		CA265_RS06570	0.79	-2.5
1,625,113	-		CA265_RS06570	0.85	-0.6
1,625,122	-		CA265_RS06570	0.85	-2.0
1,625,160	-		CA265_RS06570	0.88	-0.3
1,625,260	+				-2.8
1,625,270	-				-0.4
1,625,295	+				-1.5
1,625,346	-				-0.3
1,625,401	-				+0.2
1,625,522	-				-1.4
1,625,628	-		CA265_RS06575	0.14	+0.8
1,625,628	-		CA265_RS06575	0.14	+0.6
1,625,628	-		CA265_RS06575	0.14	+0.0
1,625,681	+		CA265_RS06575	0.17	-2.1
1,625,682	-		CA265_RS06575	0.17	-0.9
1,625,682	-		CA265_RS06575	0.17	-0.2
1,625,790	-		CA265_RS06575	0.24	-0.1
1,625,836	-		CA265_RS06575	0.26	+0.6
1,625,836	-		CA265_RS06575	0.26	-1.1
1,625,836	-		CA265_RS06575	0.26	-0.1
1,625,839	+		CA265_RS06575	0.27	-0.7
1,625,840	-		CA265_RS06575	0.27	-1.7
1,625,842	-		CA265_RS06575	0.27	+0.8
1,625,948	-		CA265_RS06575	0.33	-1.9
1,625,976	-		CA265_RS06575	0.35	-0.6
1,626,000	-		CA265_RS06575	0.36	-1.2
1,626,056	+		CA265_RS06575	0.40	-2.1
1,626,146	+		CA265_RS06575	0.45	-0.9
1,626,174	-		CA265_RS06575	0.47	-0.1
1,626,199	+		CA265_RS06575	0.49	+1.6
1,626,200	-		CA265_RS06575	0.49	-0.5
1,626,203	+		CA265_RS06575	0.49	-2.3