Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06125

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,510,291	+		CA265_RS06120	0.14	-0.1
1,510,306	+		CA265_RS06120	0.15	+2.5
1,510,310	+		CA265_RS06120	0.15	+1.5
1,510,311	-		CA265_RS06120	0.16	+0.5
1,510,324	-		CA265_RS06120	0.17	+1.4
1,510,354	+		CA265_RS06120	0.20	+2.5
1,510,437	-		CA265_RS06120	0.27	-0.2
1,510,467	+		CA265_RS06120	0.30	+2.8
1,510,500	+		CA265_RS06120	0.33	+1.8
1,510,500	+		CA265_RS06120	0.33	+1.9
1,510,542	-		CA265_RS06120	0.37	+0.4
1,510,594	+		CA265_RS06120	0.42	+2.0
1,510,625	+		CA265_RS06120	0.45	+2.0
1,510,635	+		CA265_RS06120	0.46	+2.5
1,510,635	+		CA265_RS06120	0.46	+2.6
1,510,723	+		CA265_RS06120	0.55	+3.2
1,510,723	+		CA265_RS06120	0.55	+1.2
1,510,724	-		CA265_RS06120	0.55	+0.3
1,510,724	-		CA265_RS06120	0.55	-0.3
1,510,724	-		CA265_RS06120	0.55	-1.0
1,510,734	+		CA265_RS06120	0.56	+2.7
1,510,734	+		CA265_RS06120	0.56	+2.2
1,510,746	-		CA265_RS06120	0.57	+0.4
1,510,746	-		CA265_RS06120	0.57	-0.2
1,510,762	-		CA265_RS06120	0.58	+0.6
1,510,766	+		CA265_RS06120	0.59	+2.7
1,510,846	+		CA265_RS06120	0.66	+2.4
1,510,867	-		CA265_RS06120	0.68	-1.0
1,510,887	+		CA265_RS06120	0.70	+2.7
1,510,888	-		CA265_RS06120	0.70	+0.0
1,510,937	+		CA265_RS06120	0.75	+2.4
1,510,952	-		CA265_RS06120	0.76	-0.2
1,511,010	-		CA265_RS06120	0.82	+0.8
1,511,013	+		CA265_RS06120	0.82	+2.1
1,511,020	+		CA265_RS06120	0.83	+3.4
1,511,160	-				-1.5
1,511,183	-				+1.0
1,511,219	+				+1.4
1,511,219	+				+1.6
1,511,304	+				+0.4
1,511,329	-				-2.1
1,511,371	+		CA265_RS06125	0.13	+1.6
1,511,405	+		CA265_RS06125	0.16	+2.2
1,511,405	+		CA265_RS06125	0.16	+1.7
1,511,475	+		CA265_RS06125	0.22	+2.1
1,511,476	-		CA265_RS06125	0.22	-1.8
1,511,552	-		CA265_RS06125	0.29	-0.1
1,511,553	+		CA265_RS06125	0.29	+1.5
1,511,672	+		CA265_RS06125	0.39	+2.1
1,511,673	-		CA265_RS06125	0.39	+0.5
1,511,767	-		CA265_RS06125	0.47	-0.9
1,511,793	+		CA265_RS06125	0.50	+1.7
1,511,794	-		CA265_RS06125	0.50	-0.1
1,511,798	-		CA265_RS06125	0.50	-0.5
1,511,842	-		CA265_RS06125	0.54	-0.6
1,511,842	-		CA265_RS06125	0.54	-1.2
1,511,909	+		CA265_RS06125	0.60	+2.0
1,511,919	-		CA265_RS06125	0.61	-2.0
1,511,939	+		CA265_RS06125	0.62	+1.5
1,511,940	-		CA265_RS06125	0.62	-0.3
1,511,943	+		CA265_RS06125	0.63	+0.9
1,511,958	-		CA265_RS06125	0.64	-0.2
1,511,964	-		CA265_RS06125	0.64	-0.0
1,511,972	+		CA265_RS06125	0.65	+3.5
1,511,973	-		CA265_RS06125	0.65	-0.2
1,511,980	+		CA265_RS06125	0.66	+2.2
1,512,029	+		CA265_RS06125	0.70	+2.9
1,512,093	-		CA265_RS06125	0.76	-0.4
1,512,194	-		CA265_RS06125	0.84	-0.4
1,512,194	-		CA265_RS06125	0.84	-0.8
1,512,238	-		CA265_RS06125	0.88	-0.7
1,512,299	-				+1.2
1,512,303	-				-0.3
1,512,406	-				-0.2
1,512,442	+				+1.3
1,512,442	+				-0.0
1,512,449	+				+2.1
1,512,450	-				-0.9
1,512,450	-				-0.3
1,512,496	+				+0.1
1,512,520	-				-0.5
1,512,664	+		CA265_RS06130	0.15	-0.2
1,512,777	+		CA265_RS06130	0.22	+0.4
1,512,777	+		CA265_RS06130	0.22	-1.0
1,512,778	-		CA265_RS06130	0.22	-0.9
1,512,792	+		CA265_RS06130	0.23	+0.2
1,512,793	-		CA265_RS06130	0.23	-0.1
1,512,809	+		CA265_RS06130	0.24	+0.7
1,512,813	-		CA265_RS06130	0.24	-0.6
1,512,824	+		CA265_RS06130	0.25	-0.5
1,512,860	+		CA265_RS06130	0.27	+0.3
1,512,874	-		CA265_RS06130	0.28	-0.0
1,512,904	+		CA265_RS06130	0.29	+0.6
1,512,905	-		CA265_RS06130	0.29	-0.4
1,512,934	-		CA265_RS06130	0.31	-0.5
1,512,938	+		CA265_RS06130	0.31	+0.2
1,512,939	-		CA265_RS06130	0.31	-0.4
1,512,963	+		CA265_RS06130	0.33	+0.2
1,512,964	-		CA265_RS06130	0.33	-0.6
1,513,015	+		CA265_RS06130	0.36	+0.8
1,513,016	-		CA265_RS06130	0.36	-0.8
1,513,016	-		CA265_RS06130	0.36	+0.8
1,513,016	-		CA265_RS06130	0.36	-1.4
1,513,035	-		CA265_RS06130	0.37	+0.9
1,513,038	+		CA265_RS06130	0.37	+0.2
1,513,072	+		CA265_RS06130	0.39	+0.4
1,513,072	+		CA265_RS06130	0.39	-0.2
1,513,075	-		CA265_RS06130	0.40	-0.3
1,513,075	-		CA265_RS06130	0.40	-0.1
1,513,080	-		CA265_RS06130	0.40	-0.7
1,513,169	+		CA265_RS06130	0.45	-1.9
1,513,169	+		CA265_RS06130	0.45	+0.8
1,513,176	+		CA265_RS06130	0.46	+0.9
1,513,176	+		CA265_RS06130	0.46	+0.3
1,513,177	-		CA265_RS06130	0.46	+0.0
1,513,216	+		CA265_RS06130	0.48	+0.2
1,513,216	+		CA265_RS06130	0.48	+0.6
1,513,267	-		CA265_RS06130	0.51	+0.6
1,513,305	+		CA265_RS06130	0.53	+1.6
1,513,313	+		CA265_RS06130	0.54	+1.1
1,513,334	-		CA265_RS06130	0.55	-0.9
1,513,340	+		CA265_RS06130	0.55	+0.7
1,513,344	+		CA265_RS06130	0.56	-0.0