Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04895

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,165,160	+		CA265_RS04885	0.72	+0.1
1,165,198	-				-1.3
1,165,363	+				+1.3
1,165,364	-				+0.4
1,165,364	-				-0.7
1,165,366	-				+2.8
1,165,378	-				+0.0
1,165,409	-				+0.5
1,165,474	+		CA265_RS04890	0.29	-0.5
1,165,474	+		CA265_RS04890	0.29	+0.2
1,165,475	-		CA265_RS04890	0.29	+1.0
1,165,530	-		CA265_RS04890	0.47	+0.5
1,165,628	-		CA265_RS04890	0.78	+1.2
1,165,632	+		CA265_RS04890	0.80	+0.3
1,165,637	+		CA265_RS04890	0.81	+0.0
1,165,649	-		CA265_RS04890	0.85	+1.3
1,165,679	+				-1.8
1,165,688	+				+0.1
1,165,689	-				-1.0
1,165,690	+				-0.2
1,165,691	-				+0.2
1,165,693	-				+2.1
1,165,693	-				+0.2
1,165,712	+				-0.5
1,165,800	+				-0.4
1,165,820	+				-0.3
1,165,900	-				+1.3
1,165,911	+				+0.3
1,165,932	-				+0.2
1,165,979	-				+0.5
1,166,007	+				+0.2
1,166,035	+				+2.0
1,166,156	+		CA265_RS04895	0.20	+0.7
1,166,156	+		CA265_RS04895	0.20	-1.2
1,166,260	+		CA265_RS04895	0.30	+0.6
1,166,271	+		CA265_RS04895	0.31	+0.0
1,166,271	+		CA265_RS04895	0.31	-2.3
1,166,272	-		CA265_RS04895	0.31	-0.1
1,166,310	+		CA265_RS04895	0.34	+0.9
1,166,310	+		CA265_RS04895	0.34	-0.5
1,166,364	-		CA265_RS04895	0.39	+0.6
1,166,603	+		CA265_RS04895	0.61	-0.8
1,166,608	+		CA265_RS04895	0.61	+0.1
1,166,651	+		CA265_RS04895	0.65	-0.9
1,166,847	+		CA265_RS04895	0.83	-1.1
1,166,848	-		CA265_RS04895	0.83	+0.1
1,166,848	-		CA265_RS04895	0.83	+0.5
1,166,848	-		CA265_RS04895	0.83	-0.1
1,166,849	+		CA265_RS04895	0.83	+0.8
1,167,069	+				-1.4
1,167,070	-				+0.0
1,167,177	-		CA265_RS04900	0.11	+0.0
1,167,201	-		CA265_RS04900	0.13	+0.4
1,167,238	+		CA265_RS04900	0.16	-0.6
1,167,239	-		CA265_RS04900	0.16	-0.9
1,167,239	-		CA265_RS04900	0.16	-0.5
1,167,239	-		CA265_RS04900	0.16	-0.3
1,167,242	-		CA265_RS04900	0.17	-0.1
1,167,249	+		CA265_RS04900	0.17	-0.3
1,167,249	+		CA265_RS04900	0.17	+1.0
1,167,250	-		CA265_RS04900	0.17	-0.0
1,167,250	-		CA265_RS04900	0.17	-0.3
1,167,347	-		CA265_RS04900	0.25	-0.2
1,167,415	+		CA265_RS04900	0.30	+0.2
1,167,652	+		CA265_RS04900	0.49	-0.4
1,167,652	+		CA265_RS04900	0.49	-0.9
1,167,652	+		CA265_RS04900	0.49	+0.6
1,167,653	-		CA265_RS04900	0.49	-0.1
1,167,653	-		CA265_RS04900	0.49	-0.7
1,167,653	-		CA265_RS04900	0.49	+0.1
1,167,661	-		CA265_RS04900	0.50	+0.3
1,167,769	+		CA265_RS04900	0.58	+0.4
1,167,769	+		CA265_RS04900	0.58	-0.9
1,167,769	+		CA265_RS04900	0.58	-1.0
1,167,769	+		CA265_RS04900	0.58	-0.2
1,167,770	-		CA265_RS04900	0.58	-0.0