Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04820

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,146,003	-				-0.4
1,146,062	+				-1.4
1,146,087	-				-0.0
1,146,120	-				+0.0
1,146,149	-				-0.1
1,146,157	+				-0.3
1,146,158	-				+0.1
1,146,177	+				-0.8
1,146,177	+				-0.6
1,146,248	+				+1.6
1,146,408	+		CA265_RS04815	0.67	+0.1
1,146,409	-		CA265_RS04815	0.67	-0.4
1,146,428	+		CA265_RS04815	0.75	-0.4
1,146,461	+		CA265_RS04815	0.87	+1.0
1,146,462	-		CA265_RS04815	0.88	+1.2
1,146,522	+				+0.2
1,146,523	-				-0.6
1,146,566	+				+0.1
1,146,666	+				-0.3
1,146,667	-				+0.7
1,146,671	-				+0.1
1,146,671	-				-0.4
1,146,754	-				-1.5
1,146,754	-				+1.0
1,146,757	+				-0.7
1,146,758	-				+0.1
1,146,789	-				+0.3
1,146,794	+				+0.2
1,146,797	+				+0.9
1,146,798	-				+0.8
1,146,829	-				+0.2
1,146,843	+				-1.0
1,146,844	-				+0.3
1,146,859	-				+0.4
1,146,882	-				+0.0
1,147,000	-		CA265_RS04820	0.15	-2.1
1,147,073	-		CA265_RS04820	0.25	-2.7
1,147,075	+		CA265_RS04820	0.26	-0.5
1,147,117	-		CA265_RS04820	0.31	+2.3
1,147,117	-		CA265_RS04820	0.31	-3.1
1,147,317	+		CA265_RS04820	0.60	-2.5
1,147,400	-		CA265_RS04820	0.72	-0.5
1,147,438	+		CA265_RS04820	0.77	-3.1
1,147,438	+		CA265_RS04820	0.77	+1.4
1,147,439	-		CA265_RS04820	0.77	-4.3
1,147,450	+		CA265_RS04820	0.79	-2.2
1,147,491	+		CA265_RS04820	0.85	-1.9
1,147,523	-		CA265_RS04820	0.89	-0.5
1,147,537	-				-2.0
1,147,537	-				-2.6
1,147,579	-				-1.8
1,147,601	-				-1.3
1,147,608	-				-1.6
1,147,660	-				-0.0
1,147,665	+				-2.2
1,147,678	-				+1.0
1,147,818	+				+0.8
1,147,835	+				+0.3
1,147,884	+				+0.8
1,147,998	+				-0.3
1,147,998	+				+2.0
1,147,999	-				+1.1
1,148,050	-				+1.1
1,148,124	+		CA265_RS04825	0.10	+0.9
1,148,124	+		CA265_RS04825	0.10	+0.8
1,148,125	-		CA265_RS04825	0.10	+0.6
1,148,127	+		CA265_RS04825	0.10	+0.3
1,148,192	+		CA265_RS04825	0.12	+0.7
1,148,223	+		CA265_RS04825	0.13	-1.9
1,148,277	+		CA265_RS04825	0.15	+1.2
1,148,278	-		CA265_RS04825	0.15	+0.9
1,148,278	-		CA265_RS04825	0.15	+0.8
1,148,280	+		CA265_RS04825	0.15	+0.2
1,148,281	-		CA265_RS04825	0.15	+0.9
1,148,281	-		CA265_RS04825	0.15	+1.3
1,148,305	+		CA265_RS04825	0.16	+0.4
1,148,331	-		CA265_RS04825	0.17	+0.0
1,148,497	-		CA265_RS04825	0.22	+0.2
1,148,520	+		CA265_RS04825	0.22	+1.3
1,148,521	-		CA265_RS04825	0.22	+2.3
1,148,526	+		CA265_RS04825	0.22	+0.7
1,148,527	-		CA265_RS04825	0.22	+0.0
1,148,566	+		CA265_RS04825	0.24	-0.6
1,148,572	+		CA265_RS04825	0.24	+0.2