Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04625

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,103,098	-		CA265_RS04620	0.19	-0.2
1,103,101	+		CA265_RS04620	0.19	+0.4
1,103,101	+		CA265_RS04620	0.19	+0.2
1,103,105	+		CA265_RS04620	0.20	+0.1
1,103,200	-		CA265_RS04620	0.27	+0.8
1,103,200	-		CA265_RS04620	0.27	-0.1
1,103,202	-		CA265_RS04620	0.28	+0.3
1,103,248	+		CA265_RS04620	0.31	+0.3
1,103,282	+		CA265_RS04620	0.34	+0.1
1,103,282	+		CA265_RS04620	0.34	-1.0
1,103,283	-		CA265_RS04620	0.34	-0.4
1,103,366	-		CA265_RS04620	0.41	+0.4
1,103,454	-		CA265_RS04620	0.49	-0.4
1,103,569	-		CA265_RS04620	0.58	-1.3
1,103,596	-		CA265_RS04620	0.60	+0.3
1,103,607	-		CA265_RS04620	0.61	+0.7
1,103,643	-		CA265_RS04620	0.64	-0.0
1,103,686	+		CA265_RS04620	0.68	-0.3
1,103,687	-		CA265_RS04620	0.68	-0.3
1,103,719	+		CA265_RS04620	0.70	-0.4
1,103,719	+		CA265_RS04620	0.70	-0.7
1,103,747	+		CA265_RS04620	0.73	-0.2
1,103,765	-		CA265_RS04620	0.74	-0.2
1,103,786	+		CA265_RS04620	0.76	-0.6
1,103,892	-		CA265_RS04620	0.85	-0.4
1,103,909	+		CA265_RS04620	0.86	-0.9
1,103,972	-				+1.3
1,104,002	-				-0.4
1,104,014	-				+0.3
1,104,070	+				-2.0
1,104,072	+				+0.3
1,104,119	+				+0.1
1,104,165	+				+0.4
1,104,251	-		CA265_RS04625	0.12	+0.0
1,104,251	-		CA265_RS04625	0.12	-0.2
1,104,287	-		CA265_RS04625	0.15	+1.0
1,104,295	-		CA265_RS04625	0.16	-0.6
1,104,295	-		CA265_RS04625	0.16	+0.0
1,104,331	-		CA265_RS04625	0.18	+0.7
1,104,421	+				+0.7
1,104,422	-		CA265_RS04625	0.25	-0.1
1,104,461	-		CA265_RS04625	0.28	-0.5
1,104,493	+		CA265_RS04625	0.30	+0.1
1,104,582	+		CA265_RS04625	0.37	-0.6
1,104,646	-		CA265_RS04625	0.42	+0.5
1,104,674	-		CA265_RS04625	0.44	+0.1
1,104,807	+		CA265_RS04625	0.53	-0.4
1,104,822	+		CA265_RS04625	0.55	-0.2
1,104,822	+		CA265_RS04625	0.55	+2.3
1,104,955	+		CA265_RS04625	0.64	+0.7
1,104,961	-		CA265_RS04625	0.65	-0.2
1,105,113	+		CA265_RS04625	0.76	+0.5
1,105,153	+		CA265_RS04625	0.79	-0.1
1,105,296	+		CA265_RS04625	0.90	+0.1
1,105,297	-		CA265_RS04625	0.90	-0.3
1,105,297	-		CA265_RS04625	0.90	-0.4
1,105,297	-		CA265_RS04625	0.90	+0.6
1,105,305	+				+0.1
1,105,327	-				-0.2
1,105,327	-				-0.9
1,105,331	+				-0.7
1,105,377	+				+0.1
1,105,386	-				+0.7
1,105,386	-				+0.5
1,105,545	+				-0.5
1,105,546	-				-0.9
1,105,557	+				-0.7
1,105,669	-		CA265_RS04630	0.28	+0.1
1,105,669	-		CA265_RS04630	0.28	+0.4
1,105,683	-		CA265_RS04630	0.32	+0.4
1,105,768	+		CA265_RS04630	0.53	-0.1
1,105,768	+		CA265_RS04630	0.53	-0.4
1,105,769	-		CA265_RS04630	0.53	+1.0
1,105,798	+		CA265_RS04630	0.61	-0.1
1,105,853	-		CA265_RS04630	0.74	+0.8
1,105,904	+		CA265_RS04630	0.87	-1.0
1,105,905	-		CA265_RS04630	0.87	+0.6
1,105,908	+		CA265_RS04630	0.88	+0.5
1,105,909	-		CA265_RS04630	0.88	+1.9
1,105,941	-				-0.5
1,105,969	+				-0.2
1,105,974	+				-0.4
1,106,024	+				-0.2
1,106,024	+				-1.0
1,106,025	-				+0.2
1,106,025	-				+0.8
1,106,093	+				-3.2
1,106,110	+				-0.6
1,106,111	-				+0.1
1,106,111	-				+2.3
1,106,115	-				-2.2
1,106,115	-				-1.0
1,106,174	-				-0.9
1,106,194	+				-2.5
1,106,195	-				-0.5
1,106,198	+				-2.0
1,106,215	+				-0.7
1,106,258	+				-2.3
1,106,336	-				-3.5
1,106,433	-		CA265_RS04635	0.11	-1.7