Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS02010

Experiment: R2A with Vancomycin 0.06 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA265_RS02005 and CA265_RS02010 overlap by 8 nucleotidesCA265_RS02010 and CA265_RS02015 are separated by 5 nucleotides CA265_RS02005: CA265_RS02005 - UDP-N-acetylmuramate--L-alanine ligase, at 508,085 to 509,440 _RS02005 CA265_RS02010: CA265_RS02010 - cell division protein FtsQ, at 509,433 to 510,683 _RS02010 CA265_RS02015: CA265_RS02015 - cell division protein FtsA, at 510,689 to 512,047 _RS02015 Position (kb) 509 510 511Strain fitness (log2 ratio) -1 0 1at 509.424 kb on + strandat 510.665 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with Vancomycin 0.06 mg/ml
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509,424 + -1.0
510,665 + +0.0

Or see this region's nucleotide sequence