Experiment: nitrite 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_13 and Ac3H11_14 are separated by 42 nucleotides Ac3H11_14 and Ac3H11_15 are separated by 145 nucleotides Ac3H11_15 and Ac3H11_16 are separated by 271 nucleotides
Ac3H11_13 - Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91), at 13,104 to 13,889
_13
Ac3H11_14 - FIG00349065: hypothetical protein, at 13,932 to 14,387
_14
Ac3H11_15 - hypothetical protein, at 14,533 to 14,850
_15
Ac3H11_16 - FIG00715472: hypothetical protein, at 15,122 to 15,451
_16
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 13.278 kb on + strand, within Ac3H11_13 at 13.341 kb on + strand, within Ac3H11_13 at 13.341 kb on + strand, within Ac3H11_13 at 13.342 kb on - strand, within Ac3H11_13 at 13.512 kb on + strand, within Ac3H11_13 at 13.512 kb on + strand, within Ac3H11_13 at 13.512 kb on + strand, within Ac3H11_13 at 13.513 kb on - strand, within Ac3H11_13 at 13.513 kb on - strand, within Ac3H11_13 at 13.513 kb on - strand, within Ac3H11_13 at 13.584 kb on + strand, within Ac3H11_13 at 13.584 kb on + strand, within Ac3H11_13 at 13.584 kb on + strand, within Ac3H11_13 at 13.584 kb on + strand, within Ac3H11_13 at 13.584 kb on + strand, within Ac3H11_13 at 13.585 kb on - strand, within Ac3H11_13 at 13.585 kb on - strand, within Ac3H11_13 at 13.585 kb on - strand, within Ac3H11_13 at 13.692 kb on + strand, within Ac3H11_13 at 13.692 kb on + strand, within Ac3H11_13 at 13.692 kb on + strand, within Ac3H11_13 at 13.692 kb on + strand, within Ac3H11_13 at 13.692 kb on + strand, within Ac3H11_13 at 13.693 kb on - strand, within Ac3H11_13 at 13.693 kb on - strand, within Ac3H11_13 at 13.693 kb on - strand, within Ac3H11_13 at 13.707 kb on + strand, within Ac3H11_13 at 13.708 kb on - strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.770 kb on + strand, within Ac3H11_13 at 13.771 kb on - strand, within Ac3H11_13 at 13.806 kb on + strand, within Ac3H11_13 at 13.806 kb on + strand, within Ac3H11_13 at 13.806 kb on + strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.807 kb on - strand, within Ac3H11_13 at 13.887 kb on + strand at 13.887 kb on + strand at 13.887 kb on + strand at 13.887 kb on + strand at 13.887 kb on + strand at 13.887 kb on + strand at 13.888 kb on - strand at 13.888 kb on - strand at 13.888 kb on - strand at 13.888 kb on - strand at 13.888 kb on - strand at 13.888 kb on - strand at 13.901 kb on + strand at 13.901 kb on + strand at 13.901 kb on + strand at 14.167 kb on + strand, within Ac3H11_14 at 14.167 kb on + strand, within Ac3H11_14 at 14.167 kb on + strand, within Ac3H11_14 at 14.167 kb on + strand, within Ac3H11_14 at 14.168 kb on - strand, within Ac3H11_14 at 14.168 kb on - strand, within Ac3H11_14 at 14.168 kb on - strand, within Ac3H11_14 at 14.224 kb on + strand, within Ac3H11_14 at 14.225 kb on - strand, within Ac3H11_14 at 14.269 kb on + strand, within Ac3H11_14 at 14.269 kb on + strand, within Ac3H11_14 at 14.270 kb on - strand, within Ac3H11_14 at 14.270 kb on - strand, within Ac3H11_14 at 14.323 kb on + strand, within Ac3H11_14 at 14.324 kb on - strand, within Ac3H11_14 at 14.324 kb on - strand, within Ac3H11_14 at 14.445 kb on + strand at 14.648 kb on + strand, within Ac3H11_15 at 14.649 kb on - strand, within Ac3H11_15 at 14.696 kb on + strand at 14.696 kb on + strand, within Ac3H11_15 at 14.696 kb on + strand, within Ac3H11_15 at 14.717 kb on + strand, within Ac3H11_15 at 14.717 kb on + strand, within Ac3H11_15 at 14.717 kb on + strand, within Ac3H11_15 at 14.718 kb on - strand, within Ac3H11_15 at 14.718 kb on - strand, within Ac3H11_15 at 14.718 kb on - strand, within Ac3H11_15 at 14.913 kb on - strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.915 kb on + strand at 14.916 kb on - strand at 14.916 kb on - strand at 14.916 kb on - strand at 14.916 kb on - strand at 14.919 kb on + strand at 14.925 kb on + strand at 14.925 kb on + strand at 14.925 kb on + strand at 14.926 kb on - strand at 14.926 kb on - strand at 14.926 kb on - strand at 14.926 kb on - strand at 14.926 kb on - strand at 14.926 kb on - strand at 14.934 kb on - strand at 15.046 kb on + strand at 15.046 kb on + strand at 15.046 kb on + strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.047 kb on - strand at 15.048 kb on + strand at 15.049 kb on - strand at 15.054 kb on + strand at 15.055 kb on - strand at 15.088 kb on - strand at 15.113 kb on + strand at 15.113 kb on + strand at 15.113 kb on + strand at 15.222 kb on + strand, within Ac3H11_16 at 15.222 kb on + strand, within Ac3H11_16 at 15.223 kb on - strand, within Ac3H11_16 at 15.223 kb on - strand, within Ac3H11_16 at 15.223 kb on - strand, within Ac3H11_16 at 15.249 kb on + strand, within Ac3H11_16 at 15.333 kb on + strand, within Ac3H11_16 at 15.333 kb on + strand, within Ac3H11_16 at 15.333 kb on + strand, within Ac3H11_16 at 15.334 kb on - strand, within Ac3H11_16 at 15.334 kb on - strand, within Ac3H11_16 at 15.334 kb on - strand, within Ac3H11_16 at 15.334 kb on - strand, within Ac3H11_16 at 15.334 kb on - strand, within Ac3H11_16 at 15.357 kb on + strand, within Ac3H11_16 at 15.358 kb on - strand, within Ac3H11_16
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 10 mM remove 13,278 + Ac3H11_13 0.22 -1.5 13,341 + Ac3H11_13 0.30 -0.7 13,341 + Ac3H11_13 0.30 -0.6 13,342 - Ac3H11_13 0.30 -0.1 13,512 + Ac3H11_13 0.52 -0.6 13,512 + Ac3H11_13 0.52 -1.2 13,512 + Ac3H11_13 0.52 -1.4 13,513 - Ac3H11_13 0.52 +0.3 13,513 - Ac3H11_13 0.52 +3.1 13,513 - Ac3H11_13 0.52 -1.0 13,584 + Ac3H11_13 0.61 -1.0 13,584 + Ac3H11_13 0.61 -0.6 13,584 + Ac3H11_13 0.61 +0.4 13,584 + Ac3H11_13 0.61 -1.4 13,584 + Ac3H11_13 0.61 +0.6 13,585 - Ac3H11_13 0.61 +0.6 13,585 - Ac3H11_13 0.61 -0.6 13,585 - Ac3H11_13 0.61 +0.4 13,692 + Ac3H11_13 0.75 -0.4 13,692 + Ac3H11_13 0.75 +0.7 13,692 + Ac3H11_13 0.75 -2.2 13,692 + Ac3H11_13 0.75 -2.0 13,692 + Ac3H11_13 0.75 -0.4 13,693 - Ac3H11_13 0.75 +1.3 13,693 - Ac3H11_13 0.75 -0.7 13,693 - Ac3H11_13 0.75 +0.1 13,707 + Ac3H11_13 0.77 -1.2 13,708 - Ac3H11_13 0.77 -0.2 13,770 + Ac3H11_13 0.85 +1.2 13,770 + Ac3H11_13 0.85 +0.8 13,770 + Ac3H11_13 0.85 -0.5 13,770 + Ac3H11_13 0.85 -1.2 13,770 + Ac3H11_13 0.85 -2.3 13,770 + Ac3H11_13 0.85 +1.6 13,771 - Ac3H11_13 0.85 +1.1 13,806 + Ac3H11_13 0.89 -1.3 13,806 + Ac3H11_13 0.89 +0.7 13,806 + Ac3H11_13 0.89 +1.1 13,807 - Ac3H11_13 0.89 -2.7 13,807 - Ac3H11_13 0.89 -0.3 13,807 - Ac3H11_13 0.89 -2.6 13,807 - Ac3H11_13 0.89 -1.2 13,807 - Ac3H11_13 0.89 -1.8 13,807 - Ac3H11_13 0.89 +1.2 13,887 + -0.4 13,887 + +0.6 13,887 + +0.0 13,887 + +0.9 13,887 + +1.0 13,887 + +0.7 13,888 - -0.8 13,888 - +1.8 13,888 - -0.9 13,888 - +0.3 13,888 - -1.6 13,888 - +0.8 13,901 + +0.4 13,901 + -0.2 13,901 + -1.6 14,167 + Ac3H11_14 0.52 -2.0 14,167 + Ac3H11_14 0.52 +0.2 14,167 + Ac3H11_14 0.52 -0.2 14,167 + Ac3H11_14 0.52 -0.3 14,168 - Ac3H11_14 0.52 -0.9 14,168 - Ac3H11_14 0.52 -1.9 14,168 - Ac3H11_14 0.52 +0.2 14,224 + Ac3H11_14 0.64 -0.0 14,225 - Ac3H11_14 0.64 +1.1 14,269 + Ac3H11_14 0.74 -1.9 14,269 + Ac3H11_14 0.74 -1.5 14,270 - Ac3H11_14 0.74 -1.3 14,270 - Ac3H11_14 0.74 +1.3 14,323 + Ac3H11_14 0.86 -1.4 14,324 - Ac3H11_14 0.86 -0.5 14,324 - Ac3H11_14 0.86 +0.6 14,445 + +0.8 14,648 + Ac3H11_15 0.36 -2.0 14,649 - Ac3H11_15 0.36 -0.7 14,696 + +1.8 14,696 + Ac3H11_15 0.51 +0.8 14,696 + Ac3H11_15 0.51 -0.3 14,717 + Ac3H11_15 0.58 -0.5 14,717 + Ac3H11_15 0.58 -0.8 14,717 + Ac3H11_15 0.58 -0.2 14,718 - Ac3H11_15 0.58 -0.3 14,718 - Ac3H11_15 0.58 +0.8 14,718 - Ac3H11_15 0.58 +0.4 14,913 - -0.3 14,915 + -0.3 14,915 + +0.8 14,915 + +1.6 14,915 + +0.6 14,915 + +0.7 14,915 + -2.1 14,915 + +0.6 14,915 + -0.3 14,916 - -1.2 14,916 - +0.6 14,916 - -0.4 14,916 - -0.0 14,919 + -1.0 14,925 + +0.6 14,925 + -0.1 14,925 + +3.1 14,926 - +0.3 14,926 - +0.2 14,926 - -1.4 14,926 - -0.0 14,926 - -0.7 14,926 - -2.3 14,934 - -0.5 15,046 + -1.5 15,046 + -0.4 15,046 + -0.7 15,047 - -0.4 15,047 - -0.3 15,047 - -0.3 15,047 - +1.1 15,047 - -1.9 15,047 - -0.5 15,047 - +0.1 15,047 - -1.4 15,047 - -0.5 15,048 + +0.6 15,049 - -0.2 15,054 + +1.0 15,055 - +1.4 15,088 - +1.2 15,113 + +0.5 15,113 + +0.2 15,113 + -1.8 15,222 + Ac3H11_16 0.30 +0.3 15,222 + Ac3H11_16 0.30 -1.9 15,223 - Ac3H11_16 0.31 +0.5 15,223 - Ac3H11_16 0.31 -1.9 15,223 - Ac3H11_16 0.31 +0.8 15,249 + Ac3H11_16 0.38 -1.2 15,333 + Ac3H11_16 0.64 -0.1 15,333 + Ac3H11_16 0.64 +0.2 15,333 + Ac3H11_16 0.64 +0.5 15,334 - Ac3H11_16 0.64 +0.7 15,334 - Ac3H11_16 0.64 -2.2 15,334 - Ac3H11_16 0.64 -0.0 15,334 - Ac3H11_16 0.64 -0.6 15,334 - Ac3H11_16 0.64 -0.5 15,357 + Ac3H11_16 0.71 +1.8 15,358 - Ac3H11_16 0.72 +0.2
Or see this region's nucleotide sequence