Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25120 and AZOBR_RS25125 are separated by 346 nucleotides AZOBR_RS25125 and AZOBR_RS25130 are separated by 414 nucleotides
AZOBR_RS25120: AZOBR_RS25120 - 4Fe-4S ferredoxin, at 691,288 to 694,176
_RS25120
AZOBR_RS25125: AZOBR_RS25125 - L-lactate permease, at 694,523 to 696,211
_RS25125
AZOBR_RS25130: AZOBR_RS25130 - GntR family transcriptional regulator, at 696,626 to 697,393
_RS25130
Position (kb) 694
695
696
697 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 694.061 kb on + strand at 694.083 kb on - strand at 694.083 kb on - strand at 694.160 kb on + strand at 694.457 kb on + strand at 694.548 kb on + strand at 694.548 kb on + strand at 694.548 kb on + strand at 694.548 kb on + strand at 694.549 kb on - strand at 694.549 kb on - strand at 694.549 kb on - strand at 694.549 kb on - strand at 694.549 kb on - strand at 694.908 kb on + strand at 694.951 kb on - strand, within AZOBR_RS25125 at 695.088 kb on + strand, within AZOBR_RS25125 at 695.169 kb on + strand, within AZOBR_RS25125 at 695.169 kb on + strand, within AZOBR_RS25125 at 695.170 kb on - strand, within AZOBR_RS25125 at 695.170 kb on - strand, within AZOBR_RS25125 at 695.170 kb on - strand, within AZOBR_RS25125 at 695.170 kb on - strand, within AZOBR_RS25125 at 695.298 kb on + strand, within AZOBR_RS25125 at 695.298 kb on + strand, within AZOBR_RS25125 at 695.298 kb on + strand, within AZOBR_RS25125 at 695.496 kb on + strand, within AZOBR_RS25125 at 695.497 kb on - strand, within AZOBR_RS25125 at 695.748 kb on + strand, within AZOBR_RS25125 at 695.941 kb on - strand, within AZOBR_RS25125 at 696.218 kb on + strand at 696.218 kb on + strand at 696.222 kb on + strand at 696.222 kb on + strand at 696.222 kb on + strand at 696.222 kb on + strand at 696.223 kb on - strand at 696.223 kb on - strand at 696.223 kb on - strand at 696.223 kb on - strand at 696.223 kb on - strand at 696.438 kb on + strand at 696.564 kb on + strand at 696.565 kb on - strand at 696.568 kb on + strand at 696.568 kb on + strand at 696.568 kb on + strand at 696.568 kb on + strand at 696.568 kb on + strand at 696.569 kb on - strand at 696.569 kb on - strand at 696.569 kb on - strand at 696.569 kb on - strand at 696.630 kb on + strand at 696.630 kb on + strand at 697.079 kb on + strand, within AZOBR_RS25130 at 697.080 kb on - strand, within AZOBR_RS25130 at 697.154 kb on + strand, within AZOBR_RS25130 at 697.154 kb on + strand, within AZOBR_RS25130
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 694,061 + -1.7 694,083 - -1.1 694,083 - -3.2 694,160 + -4.3 694,457 + +0.0 694,548 + -1.1 694,548 + -2.0 694,548 + -1.6 694,548 + -2.0 694,549 - -1.1 694,549 - -2.3 694,549 - -1.5 694,549 - -2.4 694,549 - -1.1 694,908 + +0.9 694,951 - AZOBR_RS25125 0.25 -2.3 695,088 + AZOBR_RS25125 0.33 -1.6 695,169 + AZOBR_RS25125 0.38 -1.3 695,169 + AZOBR_RS25125 0.38 -2.8 695,170 - AZOBR_RS25125 0.38 -0.9 695,170 - AZOBR_RS25125 0.38 -2.3 695,170 - AZOBR_RS25125 0.38 -1.1 695,170 - AZOBR_RS25125 0.38 -3.6 695,298 + AZOBR_RS25125 0.46 -1.9 695,298 + AZOBR_RS25125 0.46 -2.0 695,298 + AZOBR_RS25125 0.46 -3.2 695,496 + AZOBR_RS25125 0.58 -3.8 695,497 - AZOBR_RS25125 0.58 -2.3 695,748 + AZOBR_RS25125 0.73 -1.1 695,941 - AZOBR_RS25125 0.84 -1.3 696,218 + -1.7 696,218 + -2.4 696,222 + -1.1 696,222 + -2.0 696,222 + -2.0 696,222 + -1.1 696,223 - -1.1 696,223 - -1.4 696,223 - -2.6 696,223 - -1.5 696,223 - -0.7 696,438 + -3.5 696,564 + -0.5 696,565 - +0.6 696,568 + +0.0 696,568 + +0.0 696,568 + -0.3 696,568 + -0.7 696,568 + +0.8 696,569 - -2.8 696,569 - +0.1 696,569 - -1.0 696,569 - +2.2 696,630 + -0.1 696,630 + -2.4 697,079 + AZOBR_RS25130 0.59 -0.0 697,080 - AZOBR_RS25130 0.59 +1.9 697,154 + AZOBR_RS25130 0.69 +0.3 697,154 + AZOBR_RS25130 0.69 -0.1
Or see this region's nucleotide sequence