Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13605 and AZOBR_RS13610 overlap by 4 nucleotides AZOBR_RS13610 and AZOBR_RS13615 are separated by 9 nucleotides AZOBR_RS13615 and AZOBR_RS13620 are separated by 1 nucleotides
AZOBR_RS13605: AZOBR_RS13605 - hypothetical protein, at 2,886,564 to 2,887,628
_RS13605
AZOBR_RS13610: AZOBR_RS13610 - hypothetical protein, at 2,887,625 to 2,889,079
_RS13610
AZOBR_RS13615: AZOBR_RS13615 - hypothetical protein, at 2,889,089 to 2,890,030
_RS13615
AZOBR_RS13620: AZOBR_RS13620 - hypothetical protein, at 2,890,032 to 2,892,131
_RS13620
Position (kb)
2887
2888
2889
2890 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2886.655 kb on + strand at 2886.656 kb on - strand at 2886.656 kb on - strand at 2886.656 kb on - strand at 2886.656 kb on - strand at 2886.656 kb on - strand at 2886.656 kb on - strand at 2886.709 kb on + strand, within AZOBR_RS13605 at 2886.710 kb on - strand, within AZOBR_RS13605 at 2886.734 kb on - strand, within AZOBR_RS13605 at 2886.734 kb on - strand, within AZOBR_RS13605 at 2886.848 kb on - strand, within AZOBR_RS13605 at 2886.964 kb on + strand, within AZOBR_RS13605 at 2886.964 kb on + strand, within AZOBR_RS13605 at 2886.964 kb on + strand, within AZOBR_RS13605 at 2886.965 kb on - strand, within AZOBR_RS13605 at 2886.965 kb on - strand, within AZOBR_RS13605 at 2886.965 kb on - strand, within AZOBR_RS13605 at 2886.965 kb on - strand, within AZOBR_RS13605 at 2886.965 kb on - strand, within AZOBR_RS13605 at 2887.054 kb on + strand, within AZOBR_RS13605 at 2887.054 kb on + strand, within AZOBR_RS13605 at 2887.174 kb on + strand, within AZOBR_RS13605 at 2887.174 kb on + strand, within AZOBR_RS13605 at 2887.174 kb on + strand, within AZOBR_RS13605 at 2887.174 kb on + strand, within AZOBR_RS13605 at 2887.174 kb on + strand, within AZOBR_RS13605 at 2887.175 kb on - strand, within AZOBR_RS13605 at 2887.175 kb on - strand, within AZOBR_RS13605 at 2887.297 kb on - strand, within AZOBR_RS13605 at 2887.450 kb on + strand, within AZOBR_RS13605 at 2887.498 kb on + strand, within AZOBR_RS13605 at 2887.499 kb on - strand, within AZOBR_RS13605 at 2887.499 kb on - strand, within AZOBR_RS13605 at 2887.499 kb on - strand, within AZOBR_RS13605 at 2887.531 kb on + strand at 2887.531 kb on + strand at 2887.531 kb on + strand at 2887.531 kb on + strand at 2887.531 kb on + strand at 2887.532 kb on - strand at 2887.532 kb on - strand at 2887.904 kb on + strand, within AZOBR_RS13610 at 2887.923 kb on + strand, within AZOBR_RS13610 at 2887.923 kb on + strand, within AZOBR_RS13610 at 2887.924 kb on - strand, within AZOBR_RS13610 at 2887.924 kb on - strand, within AZOBR_RS13610 at 2887.924 kb on - strand, within AZOBR_RS13610 at 2887.924 kb on - strand, within AZOBR_RS13610 at 2887.924 kb on - strand, within AZOBR_RS13610 at 2887.974 kb on + strand, within AZOBR_RS13610 at 2887.974 kb on + strand, within AZOBR_RS13610 at 2887.974 kb on + strand, within AZOBR_RS13610 at 2887.974 kb on + strand, within AZOBR_RS13610 at 2887.975 kb on - strand, within AZOBR_RS13610 at 2887.975 kb on - strand, within AZOBR_RS13610 at 2887.975 kb on - strand, within AZOBR_RS13610 at 2887.975 kb on - strand, within AZOBR_RS13610 at 2887.999 kb on + strand, within AZOBR_RS13610 at 2888.001 kb on + strand, within AZOBR_RS13610 at 2888.001 kb on + strand, within AZOBR_RS13610 at 2888.001 kb on + strand, within AZOBR_RS13610 at 2888.002 kb on - strand, within AZOBR_RS13610 at 2888.002 kb on - strand, within AZOBR_RS13610 at 2888.002 kb on - strand, within AZOBR_RS13610 at 2888.002 kb on - strand, within AZOBR_RS13610 at 2888.158 kb on - strand, within AZOBR_RS13610 at 2888.208 kb on + strand, within AZOBR_RS13610 at 2888.208 kb on + strand, within AZOBR_RS13610 at 2888.209 kb on - strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.235 kb on + strand, within AZOBR_RS13610 at 2888.236 kb on - strand, within AZOBR_RS13610 at 2888.236 kb on - strand, within AZOBR_RS13610 at 2888.236 kb on - strand, within AZOBR_RS13610 at 2888.241 kb on + strand, within AZOBR_RS13610 at 2888.241 kb on + strand, within AZOBR_RS13610 at 2888.242 kb on - strand, within AZOBR_RS13610 at 2888.242 kb on - strand, within AZOBR_RS13610 at 2888.242 kb on - strand, within AZOBR_RS13610 at 2888.242 kb on - strand, within AZOBR_RS13610 at 2888.242 kb on - strand, within AZOBR_RS13610 at 2888.287 kb on - strand, within AZOBR_RS13610 at 2888.355 kb on + strand, within AZOBR_RS13610 at 2888.355 kb on + strand, within AZOBR_RS13610 at 2888.364 kb on + strand, within AZOBR_RS13610 at 2888.364 kb on + strand, within AZOBR_RS13610 at 2888.364 kb on + strand, within AZOBR_RS13610 at 2888.364 kb on + strand, within AZOBR_RS13610 at 2888.365 kb on - strand, within AZOBR_RS13610 at 2888.382 kb on + strand, within AZOBR_RS13610 at 2888.544 kb on + strand, within AZOBR_RS13610 at 2888.544 kb on + strand, within AZOBR_RS13610 at 2888.545 kb on - strand, within AZOBR_RS13610 at 2888.545 kb on - strand, within AZOBR_RS13610 at 2888.728 kb on - strand, within AZOBR_RS13610 at 2888.787 kb on + strand, within AZOBR_RS13610 at 2888.787 kb on + strand, within AZOBR_RS13610 at 2888.788 kb on - strand, within AZOBR_RS13610 at 2888.829 kb on + strand, within AZOBR_RS13610 at 2888.829 kb on + strand, within AZOBR_RS13610 at 2888.830 kb on - strand, within AZOBR_RS13610 at 2888.830 kb on - strand, within AZOBR_RS13610 at 2889.025 kb on + strand at 2889.025 kb on + strand at 2889.025 kb on + strand at 2889.026 kb on - strand at 2889.026 kb on - strand at 2889.026 kb on - strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.027 kb on + strand at 2889.028 kb on - strand at 2889.028 kb on - strand at 2889.028 kb on - strand at 2889.090 kb on + strand at 2889.090 kb on + strand at 2889.090 kb on + strand at 2889.091 kb on - strand at 2889.091 kb on - strand at 2889.091 kb on - strand at 2889.091 kb on - strand at 2889.135 kb on + strand at 2889.135 kb on + strand at 2889.135 kb on + strand at 2889.136 kb on - strand at 2889.136 kb on - strand at 2889.311 kb on + strand, within AZOBR_RS13615 at 2889.558 kb on + strand, within AZOBR_RS13615 at 2889.558 kb on + strand, within AZOBR_RS13615 at 2889.558 kb on + strand, within AZOBR_RS13615 at 2889.558 kb on + strand, within AZOBR_RS13615 at 2889.559 kb on - strand, within AZOBR_RS13615 at 2889.559 kb on - strand, within AZOBR_RS13615 at 2889.559 kb on - strand, within AZOBR_RS13615 at 2889.559 kb on - strand, within AZOBR_RS13615 at 2889.559 kb on - strand, within AZOBR_RS13615 at 2889.595 kb on - strand, within AZOBR_RS13615 at 2889.651 kb on + strand, within AZOBR_RS13615 at 2889.732 kb on + strand, within AZOBR_RS13615 at 2889.733 kb on + strand, within AZOBR_RS13615 at 2889.733 kb on - strand, within AZOBR_RS13615 at 2889.733 kb on - strand, within AZOBR_RS13615 at 2889.733 kb on - strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.745 kb on + strand, within AZOBR_RS13615 at 2889.746 kb on - strand, within AZOBR_RS13615 at 2889.746 kb on - strand, within AZOBR_RS13615 at 2889.747 kb on + strand, within AZOBR_RS13615 at 2889.747 kb on + strand, within AZOBR_RS13615 at 2889.747 kb on + strand, within AZOBR_RS13615 at 2889.748 kb on - strand, within AZOBR_RS13615 at 2889.748 kb on - strand, within AZOBR_RS13615 at 2889.861 kb on + strand, within AZOBR_RS13615 at 2889.861 kb on + strand, within AZOBR_RS13615 at 2889.862 kb on - strand, within AZOBR_RS13615 at 2889.862 kb on - strand, within AZOBR_RS13615 at 2889.862 kb on - strand, within AZOBR_RS13615 at 2890.055 kb on + strand at 2890.073 kb on + strand at 2890.074 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 2,886,655 + -0.6 2,886,656 - -1.5 2,886,656 - -0.8 2,886,656 - +0.1 2,886,656 - -0.7 2,886,656 - -0.6 2,886,656 - -0.3 2,886,709 + AZOBR_RS13605 0.14 -0.6 2,886,710 - AZOBR_RS13605 0.14 -0.4 2,886,734 - AZOBR_RS13605 0.16 -0.7 2,886,734 - AZOBR_RS13605 0.16 -0.3 2,886,848 - AZOBR_RS13605 0.27 +0.1 2,886,964 + AZOBR_RS13605 0.38 -0.9 2,886,964 + AZOBR_RS13605 0.38 -0.2 2,886,964 + AZOBR_RS13605 0.38 -0.2 2,886,965 - AZOBR_RS13605 0.38 +0.2 2,886,965 - AZOBR_RS13605 0.38 -0.6 2,886,965 - AZOBR_RS13605 0.38 +0.4 2,886,965 - AZOBR_RS13605 0.38 +0.3 2,886,965 - AZOBR_RS13605 0.38 +0.5 2,887,054 + AZOBR_RS13605 0.46 -0.3 2,887,054 + AZOBR_RS13605 0.46 -0.2 2,887,174 + AZOBR_RS13605 0.57 -0.6 2,887,174 + AZOBR_RS13605 0.57 -0.9 2,887,174 + AZOBR_RS13605 0.57 -1.9 2,887,174 + AZOBR_RS13605 0.57 -0.4 2,887,174 + AZOBR_RS13605 0.57 -0.2 2,887,175 - AZOBR_RS13605 0.57 -0.7 2,887,175 - AZOBR_RS13605 0.57 -0.0 2,887,297 - AZOBR_RS13605 0.69 -0.4 2,887,450 + AZOBR_RS13605 0.83 -1.1 2,887,498 + AZOBR_RS13605 0.88 -1.1 2,887,499 - AZOBR_RS13605 0.88 -0.4 2,887,499 - AZOBR_RS13605 0.88 -0.1 2,887,499 - AZOBR_RS13605 0.88 -0.7 2,887,531 + -0.1 2,887,531 + -0.6 2,887,531 + -0.3 2,887,531 + -3.3 2,887,531 + -1.9 2,887,532 - +0.3 2,887,532 - -0.7 2,887,904 + AZOBR_RS13610 0.19 -1.6 2,887,923 + AZOBR_RS13610 0.20 -0.3 2,887,923 + AZOBR_RS13610 0.20 -0.9 2,887,924 - AZOBR_RS13610 0.21 -1.0 2,887,924 - AZOBR_RS13610 0.21 -0.4 2,887,924 - AZOBR_RS13610 0.21 +1.1 2,887,924 - AZOBR_RS13610 0.21 -0.9 2,887,924 - AZOBR_RS13610 0.21 -0.2 2,887,974 + AZOBR_RS13610 0.24 -0.8 2,887,974 + AZOBR_RS13610 0.24 -0.9 2,887,974 + AZOBR_RS13610 0.24 -1.5 2,887,974 + AZOBR_RS13610 0.24 -0.9 2,887,975 - AZOBR_RS13610 0.24 +0.4 2,887,975 - AZOBR_RS13610 0.24 +0.4 2,887,975 - AZOBR_RS13610 0.24 -0.7 2,887,975 - AZOBR_RS13610 0.24 +0.2 2,887,999 + AZOBR_RS13610 0.26 -1.2 2,888,001 + AZOBR_RS13610 0.26 -0.8 2,888,001 + AZOBR_RS13610 0.26 -0.2 2,888,001 + AZOBR_RS13610 0.26 -0.5 2,888,002 - AZOBR_RS13610 0.26 -0.7 2,888,002 - AZOBR_RS13610 0.26 -0.5 2,888,002 - AZOBR_RS13610 0.26 -0.9 2,888,002 - AZOBR_RS13610 0.26 -0.3 2,888,158 - AZOBR_RS13610 0.37 -0.7 2,888,208 + AZOBR_RS13610 0.40 +0.6 2,888,208 + AZOBR_RS13610 0.40 -0.4 2,888,209 - AZOBR_RS13610 0.40 -0.7 2,888,235 + AZOBR_RS13610 0.42 -0.4 2,888,235 + AZOBR_RS13610 0.42 -0.3 2,888,235 + AZOBR_RS13610 0.42 -0.6 2,888,235 + AZOBR_RS13610 0.42 -1.1 2,888,235 + AZOBR_RS13610 0.42 -2.8 2,888,235 + AZOBR_RS13610 0.42 -1.0 2,888,235 + AZOBR_RS13610 0.42 -1.1 2,888,235 + AZOBR_RS13610 0.42 -0.6 2,888,235 + AZOBR_RS13610 0.42 -0.7 2,888,235 + AZOBR_RS13610 0.42 -0.4 2,888,235 + AZOBR_RS13610 0.42 -1.0 2,888,235 + AZOBR_RS13610 0.42 -1.0 2,888,236 - AZOBR_RS13610 0.42 -0.5 2,888,236 - AZOBR_RS13610 0.42 -1.0 2,888,236 - AZOBR_RS13610 0.42 -0.6 2,888,241 + AZOBR_RS13610 0.42 -0.9 2,888,241 + AZOBR_RS13610 0.42 -0.5 2,888,242 - AZOBR_RS13610 0.42 -1.0 2,888,242 - AZOBR_RS13610 0.42 -0.5 2,888,242 - AZOBR_RS13610 0.42 -0.5 2,888,242 - AZOBR_RS13610 0.42 -0.5 2,888,242 - AZOBR_RS13610 0.42 -0.4 2,888,287 - AZOBR_RS13610 0.45 -0.6 2,888,355 + AZOBR_RS13610 0.50 -0.2 2,888,355 + AZOBR_RS13610 0.50 -0.7 2,888,364 + AZOBR_RS13610 0.51 -1.0 2,888,364 + AZOBR_RS13610 0.51 +0.3 2,888,364 + AZOBR_RS13610 0.51 +0.7 2,888,364 + AZOBR_RS13610 0.51 -0.3 2,888,365 - AZOBR_RS13610 0.51 -1.2 2,888,382 + AZOBR_RS13610 0.52 -1.2 2,888,544 + AZOBR_RS13610 0.63 -0.9 2,888,544 + AZOBR_RS13610 0.63 -0.7 2,888,545 - AZOBR_RS13610 0.63 -0.2 2,888,545 - AZOBR_RS13610 0.63 -0.1 2,888,728 - AZOBR_RS13610 0.76 -1.2 2,888,787 + AZOBR_RS13610 0.80 -0.2 2,888,787 + AZOBR_RS13610 0.80 -0.0 2,888,788 - AZOBR_RS13610 0.80 -0.1 2,888,829 + AZOBR_RS13610 0.83 -0.7 2,888,829 + AZOBR_RS13610 0.83 -0.9 2,888,830 - AZOBR_RS13610 0.83 -0.2 2,888,830 - AZOBR_RS13610 0.83 -0.7 2,889,025 + -0.4 2,889,025 + -0.0 2,889,025 + -0.5 2,889,026 - -0.5 2,889,026 - -1.4 2,889,026 - +0.1 2,889,027 + +0.0 2,889,027 + -1.1 2,889,027 + -0.3 2,889,027 + -1.2 2,889,027 + -0.9 2,889,027 + -0.1 2,889,027 + -0.9 2,889,027 + -0.6 2,889,028 - -0.9 2,889,028 - -0.6 2,889,028 - -0.6 2,889,090 + +0.9 2,889,090 + -0.3 2,889,090 + -0.1 2,889,091 - -0.9 2,889,091 - -0.1 2,889,091 - -0.5 2,889,091 - -0.8 2,889,135 + -0.6 2,889,135 + -0.1 2,889,135 + -0.6 2,889,136 - -0.0 2,889,136 - -0.2 2,889,311 + AZOBR_RS13615 0.24 -0.5 2,889,558 + AZOBR_RS13615 0.50 +0.3 2,889,558 + AZOBR_RS13615 0.50 -0.6 2,889,558 + AZOBR_RS13615 0.50 -0.1 2,889,558 + AZOBR_RS13615 0.50 -1.5 2,889,559 - AZOBR_RS13615 0.50 -2.1 2,889,559 - AZOBR_RS13615 0.50 +0.4 2,889,559 - AZOBR_RS13615 0.50 -1.1 2,889,559 - AZOBR_RS13615 0.50 +0.3 2,889,559 - AZOBR_RS13615 0.50 -1.9 2,889,595 - AZOBR_RS13615 0.54 -0.4 2,889,651 + AZOBR_RS13615 0.60 -0.9 2,889,732 + AZOBR_RS13615 0.68 -0.7 2,889,733 + AZOBR_RS13615 0.68 -1.7 2,889,733 - AZOBR_RS13615 0.68 -1.0 2,889,733 - AZOBR_RS13615 0.68 -0.2 2,889,733 - AZOBR_RS13615 0.68 +0.2 2,889,745 + AZOBR_RS13615 0.70 +0.5 2,889,745 + AZOBR_RS13615 0.70 -1.3 2,889,745 + AZOBR_RS13615 0.70 -1.2 2,889,745 + AZOBR_RS13615 0.70 -0.4 2,889,745 + AZOBR_RS13615 0.70 -0.6 2,889,745 + AZOBR_RS13615 0.70 -1.5 2,889,746 - AZOBR_RS13615 0.70 -0.5 2,889,746 - AZOBR_RS13615 0.70 -2.4 2,889,747 + AZOBR_RS13615 0.70 -0.7 2,889,747 + AZOBR_RS13615 0.70 -0.3 2,889,747 + AZOBR_RS13615 0.70 -0.6 2,889,748 - AZOBR_RS13615 0.70 -1.1 2,889,748 - AZOBR_RS13615 0.70 +0.0 2,889,861 + AZOBR_RS13615 0.82 -0.8 2,889,861 + AZOBR_RS13615 0.82 -0.3 2,889,862 - AZOBR_RS13615 0.82 +0.1 2,889,862 - AZOBR_RS13615 0.82 -0.7 2,889,862 - AZOBR_RS13615 0.82 -0.5 2,890,055 + +0.3 2,890,073 + -0.4 2,890,074 - -1.0
Or see this region's nucleotide sequence