Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19935

Experiment: Ethanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ethanol (C)
4,381,170	+				+0.2
4,381,218	+				+0.8
4,381,218	+				+0.0
4,381,218	+				-1.5
4,381,218	+				-0.0
4,381,219	-		AO353_19930	0.10	+2.8
4,381,219	-		AO353_19930	0.10	+0.8
4,381,224	+		AO353_19930	0.11	+0.2
4,381,224	+		AO353_19930	0.11	+0.1
4,381,225	-		AO353_19930	0.11	-0.2
4,381,225	-		AO353_19930	0.11	+0.8
4,381,225	-		AO353_19930	0.11	-0.8
4,381,540	+		AO353_19930	0.74	+0.5
4,381,551	+		AO353_19930	0.77	-1.1
4,381,551	+		AO353_19930	0.77	-0.4
4,381,551	+		AO353_19930	0.77	-0.2
4,381,551	+		AO353_19930	0.77	-0.3
4,381,552	-		AO353_19930	0.77	+1.8
4,381,552	-		AO353_19930	0.77	+2.4
4,381,601	+		AO353_19930	0.87	+0.4
4,381,601	+		AO353_19930	0.87	+1.0
4,381,601	+		AO353_19930	0.87	+1.0
4,381,601	+		AO353_19930	0.87	+1.8
4,381,601	+		AO353_19930	0.87	-0.2
4,381,601	+		AO353_19930	0.87	-1.4
4,381,601	+		AO353_19930	0.87	-0.4
4,381,602	-		AO353_19930	0.87	-1.1
4,381,602	-		AO353_19930	0.87	+0.0
4,381,602	-		AO353_19930	0.87	-1.7
4,381,602	-		AO353_19930	0.87	-1.9
4,381,605	+		AO353_19930	0.88	-0.6
4,381,605	+		AO353_19930	0.88	+1.3
4,381,605	+		AO353_19930	0.88	-0.0
4,381,605	+		AO353_19930	0.88	+1.2
4,381,606	-		AO353_19930	0.88	+0.0
4,381,606	-		AO353_19930	0.88	+0.8
4,381,606	-		AO353_19930	0.88	+0.9
4,381,606	-		AO353_19930	0.88	-0.2
4,381,606	-		AO353_19930	0.88	+0.4
4,381,606	-		AO353_19930	0.88	-1.3
4,381,606	-		AO353_19930	0.88	+1.2
4,381,606	-		AO353_19930	0.88	-0.6
4,381,656	+				+0.2
4,381,657	-				-0.1
4,381,657	-				-0.8
4,381,657	-				-0.0
4,381,733	-				+0.1
4,381,797	+				-0.6
4,381,797	+				-0.0
4,381,797	+				-0.2
4,381,797	+				+1.2
4,381,798	-				+1.2
4,381,798	-				-0.9
4,381,798	-				-0.9
4,381,798	-				+1.0
4,381,798	-				-0.8
4,381,798	-				+0.0
4,381,876	-				-1.8
4,381,876	-				+1.0
4,381,919	-				-0.2
4,381,919	-				-0.6
4,381,919	-				+0.3
4,381,960	+				-0.8
4,381,960	+				-0.7
4,381,961	-				+0.2
4,381,961	-				+0.8
4,381,961	-				-1.2
4,381,961	-				-1.8
4,381,961	-				+1.8
4,382,009	+				-0.8
4,382,010	-				+0.5
4,382,010	-				-0.0
4,382,010	-				+0.8
4,382,308	+		AO353_19935	0.19	+0.8
4,382,308	+		AO353_19935	0.19	-0.7
4,382,368	+		AO353_19935	0.23	-0.3
4,382,368	+		AO353_19935	0.23	+0.5
4,382,368	+		AO353_19935	0.23	+1.2
4,382,369	-		AO353_19935	0.23	+1.0
4,382,369	-		AO353_19935	0.23	-0.2
4,382,456	+		AO353_19935	0.28	-0.6
4,382,457	-		AO353_19935	0.28	-0.4
4,382,592	+		AO353_19935	0.37	+0.5
4,382,592	+		AO353_19935	0.37	+0.3
4,382,592	+		AO353_19935	0.37	-0.9
4,382,592	+		AO353_19935	0.37	+0.3
4,382,593	-		AO353_19935	0.37	+0.4
4,382,593	-		AO353_19935	0.37	+0.2
4,382,593	-		AO353_19935	0.37	+0.4
4,382,652	+		AO353_19935	0.40	+0.2
4,382,653	-		AO353_19935	0.41	+0.2
4,382,672	+		AO353_19935	0.42	-0.5
4,382,672	+		AO353_19935	0.42	+0.2
4,382,672	+		AO353_19935	0.42	-0.0
4,382,672	+		AO353_19935	0.42	-0.2
4,382,672	+		AO353_19935	0.42	-1.6
4,382,672	+		AO353_19935	0.42	+0.4
4,382,673	-		AO353_19935	0.42	+1.2
4,382,673	-		AO353_19935	0.42	+0.0
4,382,673	-		AO353_19935	0.42	+0.2
4,382,758	+		AO353_19935	0.47	-0.0
4,382,758	+		AO353_19935	0.47	-0.1
4,382,758	+		AO353_19935	0.47	-0.7
4,382,758	+		AO353_19935	0.47	+0.4
4,382,758	+		AO353_19935	0.47	+1.4
4,382,758	+		AO353_19935	0.47	-0.7
4,382,758	+		AO353_19935	0.47	-0.6
4,382,759	-		AO353_19935	0.47	-0.2
4,382,759	-		AO353_19935	0.47	+0.8
4,382,759	-		AO353_19935	0.47	-0.2
4,382,807	-		AO353_19935	0.50	-1.1
4,383,065	+		AO353_19935	0.66	+0.2
4,383,065	+		AO353_19935	0.66	-0.4
4,383,075	+		AO353_19935	0.67	-1.2
4,383,294	+		AO353_19935	0.80	-0.8
4,383,325	+		AO353_19935	0.82	-0.6
4,383,325	+		AO353_19935	0.82	+0.1
4,383,326	-		AO353_19935	0.82	+0.0
4,383,326	-		AO353_19935	0.82	+1.4
4,383,326	-		AO353_19935	0.82	+0.4
4,383,404	+		AO353_19935	0.87	-0.4
4,383,404	+		AO353_19935	0.87	+0.7
4,383,425	+		AO353_19935	0.88	-0.0
4,383,425	+		AO353_19935	0.88	+1.0
4,383,425	+		AO353_19935	0.88	+0.0
4,383,426	-		AO353_19935	0.88	+1.4
4,383,453	+				-0.1
4,383,453	+				-0.2
4,383,453	+				-0.4
4,383,453	+				+0.4
4,383,453	+				-0.3
4,383,454	-				+1.8
4,383,454	-				-0.6
4,383,454	-				+1.4
4,383,454	-				+0.3
4,383,454	-				-1.4
4,383,454	-				+1.5
4,383,454	-				-0.4
4,383,454	-				-0.2
4,383,454	-				-0.1
4,383,454	-				-0.2
4,383,465	+				-1.2
4,383,465	+				+0.4
4,383,465	+				-2.3
4,383,465	+				-1.8
4,383,465	+				-0.9
4,383,465	+				+0.8
4,383,465	+				+0.4
4,383,465	+				-0.4
4,383,465	+				+0.3
4,383,465	+				+0.8
4,383,465	+				-0.8
4,383,465	+				-0.2
4,383,465	+				+0.0
4,383,465	+				+1.8
4,383,465	+				+1.4
4,383,465	+				-0.6
4,383,465	+				+1.2
4,383,465	+				-0.2
4,383,465	+				+0.8
4,383,465	+				-0.9
4,383,465	+				+0.1
4,383,465	+				+1.8
4,383,465	+				-2.1
4,383,465	+				-0.7
4,383,465	+				+0.1
4,383,465	+				+0.8
4,383,465	+				+2.2
4,383,466	-				+0.5
4,383,466	-				-0.9
4,383,466	-				-1.0
4,383,466	-				-0.1
4,383,466	-				+2.0
4,383,466	-				-0.9
4,383,466	-				-0.3
4,383,466	-				-1.7
4,383,466	-				-0.2
4,383,466	-				+0.2
4,383,466	-				+0.8
4,383,466	-				-1.1
4,383,466	-				-1.2
4,383,466	-				-2.6
4,383,466	-				+0.8
4,383,466	-				-1.6
4,383,466	-				-1.6
4,383,466	-				-0.6
4,383,466	-				-1.6
4,383,466	-				-0.6
4,383,466	-				-0.0
4,383,466	-				+0.6
4,383,536	+				+0.4
4,383,537	-				-1.3
4,383,650	+				-0.2
4,383,651	-				-1.0
4,383,651	-				-1.6
4,383,651	-				-0.2
4,383,651	-				-0.2
4,383,651	-				-2.0
4,383,652	+				-1.4
4,383,652	+				+1.0
4,383,652	+				-1.1
4,383,653	-				+0.9
4,383,653	-				+1.0
4,383,798	-				+0.4
4,383,810	+				+0.9
4,383,810	+				-0.5
4,383,810	+				-0.2
4,383,811	-				-0.0
4,383,811	-				+0.0
4,383,895	+				+0.8
4,383,896	-		AO353_19940	0.12	-1.4
4,383,896	-		AO353_19940	0.12	+0.8
4,383,906	+		AO353_19940	0.13	+0.6
4,383,909	+		AO353_19940	0.14	+1.4
4,383,909	+		AO353_19940	0.14	-0.8
4,383,909	+		AO353_19940	0.14	+0.3
4,383,909	+		AO353_19940	0.14	-0.2
4,383,910	-		AO353_19940	0.14	-0.9
4,383,910	-		AO353_19940	0.14	+1.1
4,383,910	-		AO353_19940	0.14	-0.6
4,383,910	-		AO353_19940	0.14	-0.8
4,383,971	+		AO353_19940	0.21	+0.5
4,383,971	+		AO353_19940	0.21	+0.6
4,383,971	+		AO353_19940	0.21	+0.8
4,383,971	+		AO353_19940	0.21	+0.8
4,383,972	-		AO353_19940	0.21	+0.0
4,383,972	-		AO353_19940	0.21	+0.3
4,383,972	-		AO353_19940	0.21	+0.6
4,383,972	-		AO353_19940	0.21	+1.0
4,383,972	-		AO353_19940	0.21	-0.3
4,384,208	+		AO353_19940	0.47	+1.8
4,384,208	+		AO353_19940	0.47	+0.9
4,384,208	+				-0.2
4,384,208	+		AO353_19940	0.47	-0.4
4,384,208	+		AO353_19940	0.47	+0.0
4,384,208	+		AO353_19940	0.47	-0.2
4,384,209	-		AO353_19940	0.47	-0.8
4,384,209	-		AO353_19940	0.47	+0.2
4,384,209	-		AO353_19940	0.47	+1.8
4,384,209	-		AO353_19940	0.47	+0.4
4,384,209	-		AO353_19940	0.47	-0.4
4,384,209	-		AO353_19940	0.47	+0.1
4,384,209	-		AO353_19940	0.47	-0.6
4,384,364	+		AO353_19940	0.65	-1.2
4,384,364	+		AO353_19940	0.65	+0.4
4,384,364	+		AO353_19940	0.65	+0.8
4,384,364	+		AO353_19940	0.65	-1.6
4,384,364	+		AO353_19940	0.65	-1.0
4,384,364	+		AO353_19940	0.65	-0.1
4,384,364	+		AO353_19940	0.65	+0.2
4,384,364	+		AO353_19940	0.65	-1.4
4,384,364	+		AO353_19940	0.65	-0.6
4,384,364	+		AO353_19940	0.65	-0.4
4,384,365	-		AO353_19940	0.65	-0.8
4,384,365	-		AO353_19940	0.65	+1.2
4,384,365	-		AO353_19940	0.65	-0.6
4,384,365	-		AO353_19940	0.65	-2.2
4,384,365	-		AO353_19940	0.65	-1.1
4,384,365	-		AO353_19940	0.65	+0.2
4,384,365	-		AO353_19940	0.65	+0.2
4,384,365	-		AO353_19940	0.65	+0.2
4,384,365	-		AO353_19940	0.65	-0.3
4,384,365	-		AO353_19940	0.65	-0.6
4,384,389	-		AO353_19940	0.67	-0.0
4,384,389	-		AO353_19940	0.67	-1.9
4,384,399	+		AO353_19940	0.69	+1.9
4,384,433	-		AO353_19940	0.72	+0.8