Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18220

Experiment: Ethanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ethanol (C)
4,014,075	+				-1.1
4,014,075	+				-0.2
4,014,198	+		AO353_18215	0.23	-1.5
4,014,198	+		AO353_18215	0.23	-0.2
4,014,198	+		AO353_18215	0.23	-1.3
4,014,198	+		AO353_18215	0.23	-0.4
4,014,198	+		AO353_18215	0.23	-0.2
4,014,198	+		AO353_18215	0.23	+0.6
4,014,199	-		AO353_18215	0.23	+0.2
4,014,199	-		AO353_18215	0.23	-0.2
4,014,199	-		AO353_18215	0.23	-0.1
4,014,199	-		AO353_18215	0.23	-0.0
4,014,207	+		AO353_18215	0.24	+0.1
4,014,207	+		AO353_18215	0.24	-2.1
4,014,207	+		AO353_18215	0.24	+1.3
4,014,208	-		AO353_18215	0.24	+1.4
4,014,208	-		AO353_18215	0.24	+0.6
4,014,208	-		AO353_18215	0.24	+0.6
4,014,208	-		AO353_18215	0.24	-1.7
4,014,208	-		AO353_18215	0.24	+0.4
4,014,208	-		AO353_18215	0.24	-0.3
4,014,208	-		AO353_18215	0.24	-2.1
4,014,421	-		AO353_18215	0.47	-0.7
4,014,657	+		AO353_18215	0.73	-1.9
4,014,657	+		AO353_18215	0.73	-1.3
4,014,658	-		AO353_18215	0.73	-1.9
4,014,877	+				+0.2
4,014,877	+				-1.3
4,014,877	+				-0.9
4,014,877	+				-1.3
4,014,878	-				+1.5
4,014,878	-				-1.5
4,014,878	-				+0.3
4,014,878	-				+0.1
4,014,986	+				+0.3
4,014,986	+				-0.7
4,014,986	+				-0.3
4,014,987	-				+0.6
4,014,987	-				-1.2
4,014,987	-				-1.3
4,014,987	-				-0.1
4,015,193	+				-1.8
4,015,193	+				-0.9
4,015,193	+				-0.9
4,015,194	-				-0.9
4,015,194	-				+1.2
4,015,292	+		AO353_18220	0.15	-0.1
4,015,292	+		AO353_18220	0.15	-0.5
4,015,292	+		AO353_18220	0.15	-0.9
4,015,292	+		AO353_18220	0.15	-1.2
4,015,293	-		AO353_18220	0.15	-1.1
4,015,293	-		AO353_18220	0.15	-0.6
4,015,293	-		AO353_18220	0.15	-1.1
4,015,343	+		AO353_18220	0.18	+0.9
4,015,344	-		AO353_18220	0.18	-1.3
4,015,344	-		AO353_18220	0.18	+0.3
4,015,344	-		AO353_18220	0.18	-2.5
4,015,344	-		AO353_18220	0.18	-1.2
4,015,402	+		AO353_18220	0.22	-1.9
4,015,457	+		AO353_18220	0.25	-0.9
4,015,457	+		AO353_18220	0.25	-1.8
4,015,457	+		AO353_18220	0.25	-0.7
4,015,457	+		AO353_18220	0.25	-0.7
4,015,457	+		AO353_18220	0.25	-0.8
4,015,457	+		AO353_18220	0.25	-0.8
4,015,457	+		AO353_18220	0.25	+1.9
4,015,457	+		AO353_18220	0.25	-0.3
4,015,457	+		AO353_18220	0.25	-1.5
4,015,457	+		AO353_18220	0.25	-0.4
4,015,457	+		AO353_18220	0.25	+0.9
4,015,458	-		AO353_18220	0.25	-1.1
4,015,458	-		AO353_18220	0.25	-1.7
4,015,458	-		AO353_18220	0.25	-1.3
4,015,458	-		AO353_18220	0.25	-1.4
4,015,458	-		AO353_18220	0.25	-1.5
4,015,458	-		AO353_18220	0.25	-3.4
4,015,458	-		AO353_18220	0.25	-1.0
4,015,458	-		AO353_18220	0.25	+0.9
4,015,458	-		AO353_18220	0.25	-1.7
4,015,458	-		AO353_18220	0.25	-0.3
4,015,458	-		AO353_18220	0.25	-1.1
4,015,458	-		AO353_18220	0.25	-0.7
4,015,458	-		AO353_18220	0.25	-0.4
4,015,459	+		AO353_18220	0.25	-1.9
4,015,459	+		AO353_18220	0.25	-1.7
4,015,460	-		AO353_18220	0.25	+1.5
4,015,460	-		AO353_18220	0.25	-1.3
4,015,526	+		AO353_18220	0.29	-0.6
4,015,526	+		AO353_18220	0.29	-1.5
4,015,526	+		AO353_18220	0.29	-1.2
4,015,526	+		AO353_18220	0.29	+0.9
4,015,526	+		AO353_18220	0.29	-1.7
4,015,527	-		AO353_18220	0.29	-0.5
4,015,527	-		AO353_18220	0.29	-0.4
4,015,676	+		AO353_18220	0.37	-0.4
4,015,676	+		AO353_18220	0.37	+0.8
4,015,676	+		AO353_18220	0.37	-1.0
4,015,676	+		AO353_18220	0.37	-0.3
4,015,676	+		AO353_18220	0.37	+0.9
4,015,676	+		AO353_18220	0.37	-0.1
4,015,676	+		AO353_18220	0.37	-0.9
4,015,676	+		AO353_18220	0.37	+0.9
4,015,676	+		AO353_18220	0.37	-1.8
4,015,676	+		AO353_18220	0.37	-1.9
4,015,676	+		AO353_18220	0.37	-3.2
4,015,676	+		AO353_18220	0.37	-0.9
4,015,676	+		AO353_18220	0.37	-2.8
4,015,677	-		AO353_18220	0.38	-1.0
4,015,677	-		AO353_18220	0.38	+0.3
4,015,677	-		AO353_18220	0.38	-0.7
4,015,677	-		AO353_18220	0.38	+2.2
4,015,677	-		AO353_18220	0.38	-1.7
4,015,677	-		AO353_18220	0.38	-0.5
4,015,677	-		AO353_18220	0.38	-2.1
4,015,677	-		AO353_18220	0.38	-2.0
4,015,677	-		AO353_18220	0.38	-0.9
4,015,677	-		AO353_18220	0.38	-1.1
4,015,677	-		AO353_18220	0.38	-1.1
4,015,677	-		AO353_18220	0.38	-0.9
4,015,677	-		AO353_18220	0.38	-2.2
4,015,677	-		AO353_18220	0.38	-1.3
4,015,679	-		AO353_18220	0.38	-0.9
4,015,802	+		AO353_18220	0.45	-0.4
4,015,802	+		AO353_18220	0.45	-1.0
4,015,802	+		AO353_18220	0.45	-1.8
4,015,802	+		AO353_18220	0.45	-1.1
4,015,802	+		AO353_18220	0.45	-1.1
4,015,802	+		AO353_18220	0.45	+0.7
4,015,802	+		AO353_18220	0.45	+0.3
4,015,802	+		AO353_18220	0.45	-1.5
4,015,803	-		AO353_18220	0.45	-0.2
4,015,803	-		AO353_18220	0.45	-1.3
4,015,886	+		AO353_18220	0.50	-0.6
4,015,886	+		AO353_18220	0.50	-1.4
4,015,886	+		AO353_18220	0.50	-0.9
4,015,886	+		AO353_18220	0.50	-0.9
4,015,886	+		AO353_18220	0.50	-0.7
4,015,886	+		AO353_18220	0.50	-1.5
4,015,887	-		AO353_18220	0.50	-1.3
4,015,887	-		AO353_18220	0.50	-1.5
4,015,887	-		AO353_18220	0.50	-0.9
4,015,887	-		AO353_18220	0.50	-2.7
4,015,887	-		AO353_18220	0.50	-2.3
4,015,887	-		AO353_18220	0.50	-1.2
4,015,887	-		AO353_18220	0.50	-2.0
4,015,887	-		AO353_18220	0.50	-0.3
4,015,887	-		AO353_18220	0.50	-0.8
4,015,887	-		AO353_18220	0.50	-0.4
4,015,904	+		AO353_18220	0.51	-2.3
4,015,905	-		AO353_18220	0.51	-1.0
4,016,105	+		AO353_18220	0.62	-1.1
4,016,105	+		AO353_18220	0.62	-2.3
4,016,105	+		AO353_18220	0.62	-0.5
4,016,105	+		AO353_18220	0.62	-2.5
4,016,309	+		AO353_18220	0.74	-1.2
4,016,309	+		AO353_18220	0.74	-1.4
4,016,310	-		AO353_18220	0.74	-1.1
4,016,310	-		AO353_18220	0.74	-2.8
4,016,358	-		AO353_18220	0.77	-0.7
4,016,456	+		AO353_18220	0.83	+0.9
4,016,457	-		AO353_18220	0.83	-2.0
4,016,457	-		AO353_18220	0.83	-2.0
4,016,457	-		AO353_18220	0.83	-2.3
4,016,457	-		AO353_18220	0.83	-1.7
4,016,457	-		AO353_18220	0.83	-1.1
4,016,462	+		AO353_18220	0.83	-2.0
4,016,654	+				+0.1
4,016,654	+				+0.7
4,016,654	+				-2.1
4,016,654	+				-2.7
4,016,654	+				+1.2
4,016,654	+				-1.5
4,016,654	+				-0.4
4,016,654	+				-1.4
4,016,655	-				+0.2
4,016,655	-				-2.5
4,016,655	-				-1.8
4,016,655	-				-2.3
4,016,655	-				-0.4
4,016,655	-				+1.3
4,016,655	-				-0.4
4,016,655	-				-1.8
4,016,655	-				+0.1
4,016,655	-				-1.8
4,016,655	-				-0.4
4,016,667	-				-1.2
4,016,667	-				+0.1
4,016,922	+				-0.5
4,016,923	-				+0.1
4,016,937	+				+0.0
4,016,937	+				-2.4
4,016,938	-				-0.6
4,017,243	-				-1.2
4,017,400	+		AO353_18225	0.12	-0.2
4,017,401	-		AO353_18225	0.12	+0.3
4,017,705	+		AO353_18225	0.19	+0.3