Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17280 and AO353_17285 are separated by 19 nucleotides AO353_17285 and AO353_17290 are separated by 157 nucleotides AO353_17290 and AO353_17295 overlap by 4 nucleotides
AO353_17280: AO353_17280 - transposase, at 3,819,145 to 3,820,575
_17280
AO353_17285: AO353_17285 - hypothetical protein, at 3,820,595 to 3,820,807
_17285
AO353_17290: AO353_17290 - multidrug transporter, at 3,820,965 to 3,822,425
_17290
AO353_17295: AO353_17295 - multidrug transporter, at 3,822,422 to 3,825,589
_17295
Position (kb)
3820
3821
3822
3823 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3820.805 kb on + strand at 3820.805 kb on + strand at 3820.805 kb on + strand at 3820.815 kb on + strand at 3820.815 kb on + strand at 3820.815 kb on + strand at 3820.815 kb on + strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.816 kb on - strand at 3820.819 kb on + strand at 3820.819 kb on + strand at 3820.820 kb on - strand at 3820.820 kb on - strand at 3820.836 kb on + strand at 3820.837 kb on - strand at 3820.861 kb on + strand at 3820.861 kb on + strand at 3820.861 kb on + strand at 3820.861 kb on + strand at 3820.861 kb on + strand at 3820.861 kb on + strand at 3820.862 kb on - strand at 3820.862 kb on - strand at 3820.862 kb on - strand at 3820.862 kb on - strand at 3820.862 kb on - strand at 3820.862 kb on - strand at 3820.877 kb on + strand at 3820.877 kb on + strand at 3820.877 kb on + strand at 3820.877 kb on + strand at 3820.878 kb on - strand at 3820.878 kb on - strand at 3820.878 kb on - strand at 3820.878 kb on - strand at 3820.878 kb on - strand at 3820.891 kb on + strand at 3820.891 kb on + strand at 3820.891 kb on + strand at 3820.891 kb on + strand at 3820.891 kb on + strand at 3820.891 kb on + strand at 3820.892 kb on - strand at 3820.892 kb on - strand at 3820.898 kb on + strand at 3820.899 kb on - strand at 3821.050 kb on + strand at 3821.050 kb on + strand at 3821.050 kb on + strand at 3821.050 kb on + strand at 3821.051 kb on - strand at 3821.051 kb on - strand at 3821.051 kb on - strand at 3821.134 kb on - strand, within AO353_17290 at 3821.191 kb on + strand, within AO353_17290 at 3821.191 kb on + strand, within AO353_17290 at 3821.191 kb on + strand, within AO353_17290 at 3821.191 kb on + strand, within AO353_17290 at 3821.191 kb on + strand, within AO353_17290 at 3821.192 kb on - strand, within AO353_17290 at 3821.192 kb on - strand, within AO353_17290 at 3821.192 kb on - strand, within AO353_17290 at 3821.192 kb on - strand, within AO353_17290 at 3821.305 kb on + strand, within AO353_17290 at 3821.342 kb on - strand, within AO353_17290 at 3821.599 kb on - strand, within AO353_17290 at 3821.884 kb on + strand, within AO353_17290 at 3821.885 kb on - strand, within AO353_17290 at 3821.885 kb on - strand, within AO353_17290 at 3821.885 kb on - strand, within AO353_17290 at 3821.885 kb on - strand, within AO353_17290 at 3821.950 kb on + strand, within AO353_17290 at 3821.951 kb on - strand, within AO353_17290 at 3822.034 kb on + strand, within AO353_17290 at 3822.034 kb on + strand, within AO353_17290 at 3822.034 kb on + strand, within AO353_17290 at 3822.035 kb on - strand, within AO353_17290 at 3822.411 kb on + strand at 3822.411 kb on + strand at 3822.439 kb on + strand at 3822.439 kb on + strand at 3822.440 kb on - strand at 3822.440 kb on - strand at 3822.449 kb on + strand at 3822.450 kb on - strand at 3822.450 kb on - strand at 3822.450 kb on - strand at 3822.537 kb on - strand at 3822.804 kb on + strand, within AO353_17295 at 3822.804 kb on + strand, within AO353_17295 at 3822.805 kb on - strand, within AO353_17295 at 3822.805 kb on - strand, within AO353_17295 at 3822.805 kb on - strand, within AO353_17295 at 3822.805 kb on - strand, within AO353_17295 at 3822.805 kb on - strand, within AO353_17295 at 3822.866 kb on + strand, within AO353_17295 at 3822.866 kb on + strand, within AO353_17295 at 3822.906 kb on + strand, within AO353_17295 at 3822.906 kb on + strand, within AO353_17295 at 3822.907 kb on - strand, within AO353_17295 at 3822.951 kb on + strand, within AO353_17295 at 3822.951 kb on + strand, within AO353_17295 at 3822.990 kb on + strand, within AO353_17295 at 3822.990 kb on + strand, within AO353_17295 at 3822.990 kb on + strand, within AO353_17295 at 3822.990 kb on + strand, within AO353_17295 at 3822.991 kb on - strand, within AO353_17295 at 3822.991 kb on - strand, within AO353_17295 at 3823.013 kb on - strand, within AO353_17295 at 3823.116 kb on - strand, within AO353_17295 at 3823.116 kb on - strand, within AO353_17295 at 3823.116 kb on - strand, within AO353_17295 at 3823.125 kb on + strand, within AO353_17295 at 3823.125 kb on + strand, within AO353_17295 at 3823.126 kb on - strand, within AO353_17295 at 3823.149 kb on + strand, within AO353_17295 at 3823.149 kb on + strand, within AO353_17295 at 3823.150 kb on - strand, within AO353_17295 at 3823.150 kb on - strand, within AO353_17295 at 3823.150 kb on - strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.208 kb on + strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.209 kb on - strand, within AO353_17295 at 3823.212 kb on + strand, within AO353_17295 at 3823.212 kb on + strand, within AO353_17295 at 3823.213 kb on - strand, within AO353_17295 at 3823.213 kb on - strand, within AO353_17295 at 3823.213 kb on - strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.262 kb on + strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.263 kb on - strand, within AO353_17295 at 3823.266 kb on + strand, within AO353_17295 at 3823.267 kb on - strand, within AO353_17295 at 3823.267 kb on - strand, within AO353_17295 at 3823.267 kb on - strand, within AO353_17295 at 3823.308 kb on + strand, within AO353_17295 at 3823.308 kb on + strand, within AO353_17295 at 3823.308 kb on + strand, within AO353_17295 at 3823.308 kb on + strand, within AO353_17295 at 3823.308 kb on + strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.309 kb on - strand, within AO353_17295 at 3823.312 kb on + strand, within AO353_17295 at 3823.313 kb on - strand, within AO353_17295 at 3823.313 kb on - strand, within AO353_17295 at 3823.401 kb on + strand, within AO353_17295 at 3823.401 kb on + strand, within AO353_17295
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 3,820,805 + +0.4 3,820,805 + +0.2 3,820,805 + -0.2 3,820,815 + -0.6 3,820,815 + +0.0 3,820,815 + -0.2 3,820,815 + -1.7 3,820,816 - +0.4 3,820,816 - +0.4 3,820,816 - +0.3 3,820,816 - +1.0 3,820,816 - -0.0 3,820,816 - -1.1 3,820,816 - -0.4 3,820,819 + -1.6 3,820,819 + +0.4 3,820,820 - -1.4 3,820,820 - -0.3 3,820,836 + +0.8 3,820,837 - +0.4 3,820,861 + -0.2 3,820,861 + -0.4 3,820,861 + -1.5 3,820,861 + +0.7 3,820,861 + +1.5 3,820,861 + +0.4 3,820,862 - -0.4 3,820,862 - +1.0 3,820,862 - -0.6 3,820,862 - +1.0 3,820,862 - -0.6 3,820,862 - +0.2 3,820,877 + -0.7 3,820,877 + +1.0 3,820,877 + -0.5 3,820,877 + -1.3 3,820,878 - +0.7 3,820,878 - -0.7 3,820,878 - -2.1 3,820,878 - +0.5 3,820,878 - -0.6 3,820,891 + +1.0 3,820,891 + -0.9 3,820,891 + -1.6 3,820,891 + -1.8 3,820,891 + +0.1 3,820,891 + -0.6 3,820,892 - +0.0 3,820,892 - -1.1 3,820,898 + +0.5 3,820,899 - +0.4 3,821,050 + -0.3 3,821,050 + -0.3 3,821,050 + +0.2 3,821,050 + -0.8 3,821,051 - +1.0 3,821,051 - -0.3 3,821,051 - -0.6 3,821,134 - AO353_17290 0.12 +0.2 3,821,191 + AO353_17290 0.15 -0.3 3,821,191 + AO353_17290 0.15 +0.7 3,821,191 + AO353_17290 0.15 -1.4 3,821,191 + AO353_17290 0.15 -2.1 3,821,191 + AO353_17290 0.15 +0.7 3,821,192 - AO353_17290 0.16 +0.4 3,821,192 - AO353_17290 0.16 -1.3 3,821,192 - AO353_17290 0.16 -0.3 3,821,192 - AO353_17290 0.16 -0.3 3,821,305 + AO353_17290 0.23 -1.4 3,821,342 - AO353_17290 0.26 -1.0 3,821,599 - AO353_17290 0.43 -1.8 3,821,884 + AO353_17290 0.63 -0.7 3,821,885 - AO353_17290 0.63 -0.1 3,821,885 - AO353_17290 0.63 -0.9 3,821,885 - AO353_17290 0.63 -0.3 3,821,885 - AO353_17290 0.63 -1.2 3,821,950 + AO353_17290 0.67 -0.2 3,821,951 - AO353_17290 0.67 -2.4 3,822,034 + AO353_17290 0.73 -0.8 3,822,034 + AO353_17290 0.73 +0.1 3,822,034 + AO353_17290 0.73 -2.1 3,822,035 - AO353_17290 0.73 -0.7 3,822,411 + +0.6 3,822,411 + -0.6 3,822,439 + -1.0 3,822,439 + -2.5 3,822,440 - -0.1 3,822,440 - +1.5 3,822,449 + +0.4 3,822,450 - -0.8 3,822,450 - +1.0 3,822,450 - +2.0 3,822,537 - +1.0 3,822,804 + AO353_17295 0.12 -2.0 3,822,804 + AO353_17295 0.12 +1.2 3,822,805 - AO353_17295 0.12 +0.5 3,822,805 - AO353_17295 0.12 +0.0 3,822,805 - AO353_17295 0.12 +0.4 3,822,805 - AO353_17295 0.12 +0.4 3,822,805 - AO353_17295 0.12 -0.3 3,822,866 + AO353_17295 0.14 +0.7 3,822,866 + AO353_17295 0.14 +0.8 3,822,906 + AO353_17295 0.15 -1.7 3,822,906 + AO353_17295 0.15 +0.6 3,822,907 - AO353_17295 0.15 -1.1 3,822,951 + AO353_17295 0.17 -0.1 3,822,951 + AO353_17295 0.17 -1.3 3,822,990 + AO353_17295 0.18 -0.6 3,822,990 + AO353_17295 0.18 -1.2 3,822,990 + AO353_17295 0.18 +0.8 3,822,990 + AO353_17295 0.18 +0.0 3,822,991 - AO353_17295 0.18 +0.0 3,822,991 - AO353_17295 0.18 +0.6 3,823,013 - AO353_17295 0.19 +0.1 3,823,116 - AO353_17295 0.22 +0.6 3,823,116 - AO353_17295 0.22 -0.7 3,823,116 - AO353_17295 0.22 +0.2 3,823,125 + AO353_17295 0.22 -0.8 3,823,125 + AO353_17295 0.22 -0.5 3,823,126 - AO353_17295 0.22 -0.4 3,823,149 + AO353_17295 0.23 -0.4 3,823,149 + AO353_17295 0.23 -0.8 3,823,150 - AO353_17295 0.23 +0.1 3,823,150 - AO353_17295 0.23 +0.8 3,823,150 - AO353_17295 0.23 -0.7 3,823,208 + AO353_17295 0.25 +0.2 3,823,208 + AO353_17295 0.25 +0.2 3,823,208 + AO353_17295 0.25 -0.1 3,823,208 + AO353_17295 0.25 -0.6 3,823,208 + AO353_17295 0.25 +1.2 3,823,208 + AO353_17295 0.25 -0.1 3,823,208 + AO353_17295 0.25 -2.1 3,823,208 + AO353_17295 0.25 +1.0 3,823,209 - AO353_17295 0.25 +2.4 3,823,209 - AO353_17295 0.25 -1.0 3,823,209 - AO353_17295 0.25 -1.8 3,823,209 - AO353_17295 0.25 +0.2 3,823,209 - AO353_17295 0.25 +0.5 3,823,209 - AO353_17295 0.25 -1.4 3,823,209 - AO353_17295 0.25 +1.3 3,823,209 - AO353_17295 0.25 -0.2 3,823,209 - AO353_17295 0.25 +2.6 3,823,212 + AO353_17295 0.25 +0.6 3,823,212 + AO353_17295 0.25 -1.2 3,823,213 - AO353_17295 0.25 +0.4 3,823,213 - AO353_17295 0.25 -0.0 3,823,213 - AO353_17295 0.25 +0.3 3,823,262 + AO353_17295 0.27 -1.4 3,823,262 + AO353_17295 0.27 +0.3 3,823,262 + AO353_17295 0.27 -1.3 3,823,262 + AO353_17295 0.27 +1.2 3,823,262 + AO353_17295 0.27 +0.4 3,823,262 + AO353_17295 0.27 -0.9 3,823,262 + AO353_17295 0.27 -0.5 3,823,262 + AO353_17295 0.27 +0.4 3,823,262 + AO353_17295 0.27 +0.7 3,823,262 + AO353_17295 0.27 -0.2 3,823,262 + AO353_17295 0.27 -0.6 3,823,262 + AO353_17295 0.27 -1.2 3,823,263 - AO353_17295 0.27 +1.4 3,823,263 - AO353_17295 0.27 +0.8 3,823,263 - AO353_17295 0.27 +0.1 3,823,263 - AO353_17295 0.27 +0.7 3,823,263 - AO353_17295 0.27 -0.6 3,823,263 - AO353_17295 0.27 -1.4 3,823,263 - AO353_17295 0.27 +0.3 3,823,263 - AO353_17295 0.27 -1.1 3,823,263 - AO353_17295 0.27 +0.4 3,823,263 - AO353_17295 0.27 +0.4 3,823,266 + AO353_17295 0.27 -0.3 3,823,267 - AO353_17295 0.27 +0.0 3,823,267 - AO353_17295 0.27 -1.1 3,823,267 - AO353_17295 0.27 +1.0 3,823,308 + AO353_17295 0.28 -0.6 3,823,308 + AO353_17295 0.28 -0.3 3,823,308 + AO353_17295 0.28 +2.0 3,823,308 + AO353_17295 0.28 -2.2 3,823,308 + AO353_17295 0.28 -0.3 3,823,309 - AO353_17295 0.28 -0.5 3,823,309 - AO353_17295 0.28 -1.7 3,823,309 - AO353_17295 0.28 +0.2 3,823,309 - AO353_17295 0.28 -1.7 3,823,309 - AO353_17295 0.28 -1.3 3,823,309 - AO353_17295 0.28 +1.6 3,823,309 - AO353_17295 0.28 +1.3 3,823,309 - AO353_17295 0.28 -1.0 3,823,309 - AO353_17295 0.28 -1.6 3,823,309 - AO353_17295 0.28 -0.6 3,823,312 + AO353_17295 0.28 -0.3 3,823,313 - AO353_17295 0.28 +0.0 3,823,313 - AO353_17295 0.28 -1.8 3,823,401 + AO353_17295 0.31 -0.8 3,823,401 + AO353_17295 0.31 +0.3
Or see this region's nucleotide sequence