Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02635 and AO353_02640 overlap by 4 nucleotides AO353_02640 and AO353_02645 are separated by 473 nucleotides
AO353_02635: AO353_02635 - cobyrinic acid a,c-diamide synthase, at 561,349 to 562,686
_02635
AO353_02640: AO353_02640 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 562,683 to 563,294
_02640
AO353_02645: AO353_02645 - hypothetical protein, at 563,768 to 564,352
_02645
Position (kb) 562
563
564 Strain fitness (log2 ratio) -1
0
1
2 at 561.707 kb on + strand, within AO353_02635 at 561.707 kb on + strand, within AO353_02635 at 561.707 kb on + strand, within AO353_02635 at 561.707 kb on + strand, within AO353_02635 at 561.708 kb on - strand, within AO353_02635 at 561.708 kb on - strand, within AO353_02635 at 561.708 kb on - strand, within AO353_02635 at 561.833 kb on + strand, within AO353_02635 at 561.833 kb on + strand, within AO353_02635 at 561.833 kb on + strand, within AO353_02635 at 561.834 kb on - strand, within AO353_02635 at 561.834 kb on - strand, within AO353_02635 at 561.834 kb on - strand, within AO353_02635 at 561.834 kb on - strand, within AO353_02635 at 561.929 kb on + strand, within AO353_02635 at 561.929 kb on + strand, within AO353_02635 at 561.929 kb on + strand, within AO353_02635 at 561.929 kb on + strand, within AO353_02635 at 561.929 kb on + strand, within AO353_02635 at 561.930 kb on - strand, within AO353_02635 at 561.930 kb on - strand, within AO353_02635 at 562.172 kb on + strand, within AO353_02635 at 562.499 kb on + strand, within AO353_02635 at 562.499 kb on + strand, within AO353_02635 at 562.804 kb on - strand, within AO353_02640 at 562.864 kb on + strand, within AO353_02640 at 563.336 kb on + strand at 563.336 kb on + strand at 563.337 kb on - strand at 563.337 kb on - strand at 563.342 kb on + strand at 563.342 kb on + strand at 563.481 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.490 kb on - strand at 563.490 kb on - strand at 563.612 kb on + strand at 563.612 kb on + strand at 563.613 kb on - strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.639 kb on - strand at 563.639 kb on - strand at 563.740 kb on + strand at 563.740 kb on + strand at 563.741 kb on - strand at 563.741 kb on - strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.850 kb on - strand, within AO353_02645 at 563.882 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.996 kb on - strand, within AO353_02645 at 563.996 kb on - strand, within AO353_02645 at 564.041 kb on + strand, within AO353_02645 at 564.041 kb on + strand, within AO353_02645 at 564.134 kb on + strand, within AO353_02645 at 564.134 kb on + strand, within AO353_02645 at 564.197 kb on - strand, within AO353_02645 at 564.264 kb on - strand, within AO353_02645 at 564.278 kb on + strand, within AO353_02645
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 561,707 + AO353_02635 0.27 +0.1 561,707 + AO353_02635 0.27 -0.3 561,707 + AO353_02635 0.27 -1.7 561,707 + AO353_02635 0.27 +1.1 561,708 - AO353_02635 0.27 +0.6 561,708 - AO353_02635 0.27 +0.7 561,708 - AO353_02635 0.27 -0.4 561,833 + AO353_02635 0.36 +1.2 561,833 + AO353_02635 0.36 +0.3 561,833 + AO353_02635 0.36 +0.5 561,834 - AO353_02635 0.36 -0.3 561,834 - AO353_02635 0.36 +0.2 561,834 - AO353_02635 0.36 +0.1 561,834 - AO353_02635 0.36 -0.1 561,929 + AO353_02635 0.43 -0.4 561,929 + AO353_02635 0.43 -1.7 561,929 + AO353_02635 0.43 +1.6 561,929 + AO353_02635 0.43 -0.4 561,929 + AO353_02635 0.43 +1.1 561,930 - AO353_02635 0.43 -0.2 561,930 - AO353_02635 0.43 +1.3 562,172 + AO353_02635 0.62 -0.7 562,499 + AO353_02635 0.86 +1.1 562,499 + AO353_02635 0.86 -0.6 562,804 - AO353_02640 0.20 -0.7 562,864 + AO353_02640 0.30 -1.2 563,336 + +0.3 563,336 + +0.6 563,337 - -0.7 563,337 - -0.4 563,342 + -0.1 563,342 + +0.8 563,481 + +0.2 563,489 + -0.3 563,489 + -0.9 563,489 + +1.4 563,489 + -1.0 563,489 + -1.0 563,490 - +0.1 563,490 - -0.1 563,612 + -0.1 563,612 + -1.0 563,613 - -0.2 563,638 + -0.1 563,638 + -0.4 563,638 + +0.1 563,638 + -0.4 563,639 - +2.3 563,639 - -0.7 563,740 + +0.7 563,740 + +0.7 563,741 - -0.8 563,741 - +1.3 563,745 + +0.1 563,745 + -1.7 563,745 + -0.2 563,745 + +0.6 563,745 + +1.1 563,745 + +0.3 563,746 - +0.3 563,746 - +0.9 563,746 - +0.2 563,746 - +1.3 563,746 - -0.1 563,746 - -1.2 563,850 - AO353_02645 0.14 -0.9 563,882 + AO353_02645 0.19 -0.7 563,995 + AO353_02645 0.39 -1.4 563,995 + AO353_02645 0.39 -0.9 563,995 + AO353_02645 0.39 -0.8 563,996 - AO353_02645 0.39 -0.1 563,996 - AO353_02645 0.39 -0.8 564,041 + AO353_02645 0.47 -0.3 564,041 + AO353_02645 0.47 -0.7 564,134 + AO353_02645 0.63 -1.4 564,134 + AO353_02645 0.63 +0.3 564,197 - AO353_02645 0.73 +0.3 564,264 - AO353_02645 0.85 -0.3 564,278 + AO353_02645 0.87 +0.9
Or see this region's nucleotide sequence