Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01940 and AO353_01945 are separated by 187 nucleotides AO353_01945 and AO353_01950 are separated by 21 nucleotides AO353_01950 and AO353_01955 are separated by 89 nucleotides
AO353_01940: AO353_01940 - pyruvate kinase, at 410,246 to 411,661
_01940
AO353_01945: AO353_01945 - urea transporter, at 411,849 to 412,769
_01945
AO353_01950: AO353_01950 - ion transporter, at 412,791 to 413,615
_01950
AO353_01955: AO353_01955 - thiosulfate transporter subunit, at 413,705 to 414,703
_01955
Position (kb) 411
412
413 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 411.355 kb on - strand, within AO353_01940 at 411.371 kb on + strand, within AO353_01940 at 411.371 kb on + strand, within AO353_01940 at 411.371 kb on + strand, within AO353_01940 at 411.371 kb on + strand, within AO353_01940 at 411.372 kb on - strand, within AO353_01940 at 411.372 kb on - strand, within AO353_01940 at 411.372 kb on - strand, within AO353_01940 at 411.372 kb on - strand, within AO353_01940 at 411.583 kb on + strand at 411.583 kb on + strand at 411.583 kb on + strand at 411.583 kb on + strand at 411.583 kb on + strand at 411.583 kb on + strand at 411.583 kb on + strand at 411.584 kb on - strand at 411.584 kb on - strand at 411.643 kb on + strand at 411.644 kb on - strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.645 kb on + strand at 411.718 kb on + strand at 411.719 kb on - strand at 411.719 kb on - strand at 411.719 kb on - strand at 411.719 kb on - strand at 411.722 kb on + strand at 411.722 kb on + strand at 411.722 kb on + strand at 411.723 kb on - strand at 411.723 kb on - strand at 411.723 kb on - strand at 411.738 kb on + strand at 411.738 kb on + strand at 411.739 kb on - strand at 411.740 kb on + strand at 411.740 kb on + strand at 411.752 kb on + strand at 411.753 kb on - strand at 411.839 kb on - strand at 411.975 kb on - strand, within AO353_01945 at 411.975 kb on - strand, within AO353_01945 at 411.975 kb on - strand, within AO353_01945 at 412.083 kb on + strand, within AO353_01945 at 412.083 kb on + strand, within AO353_01945 at 412.083 kb on + strand, within AO353_01945 at 412.084 kb on - strand, within AO353_01945 at 412.084 kb on - strand, within AO353_01945 at 412.233 kb on + strand, within AO353_01945 at 412.233 kb on + strand, within AO353_01945 at 412.234 kb on - strand, within AO353_01945 at 412.297 kb on + strand, within AO353_01945 at 412.298 kb on - strand, within AO353_01945 at 412.521 kb on + strand, within AO353_01945 at 412.521 kb on + strand, within AO353_01945 at 412.521 kb on + strand, within AO353_01945 at 412.521 kb on + strand, within AO353_01945 at 412.522 kb on - strand, within AO353_01945 at 412.528 kb on - strand, within AO353_01945 at 412.528 kb on - strand, within AO353_01945 at 412.528 kb on - strand, within AO353_01945 at 412.528 kb on - strand, within AO353_01945 at 412.596 kb on - strand, within AO353_01945 at 412.718 kb on + strand at 412.718 kb on + strand at 412.718 kb on + strand at 412.718 kb on + strand at 412.719 kb on - strand at 412.719 kb on - strand at 412.719 kb on - strand at 412.719 kb on - strand at 412.719 kb on - strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.757 kb on + strand at 412.758 kb on - strand at 412.772 kb on + strand at 412.772 kb on + strand at 412.772 kb on + strand at 412.773 kb on - strand at 412.773 kb on - strand at 412.773 kb on - strand at 412.824 kb on + strand at 412.824 kb on + strand at 412.824 kb on + strand at 412.825 kb on - strand at 412.966 kb on - strand, within AO353_01950 at 412.966 kb on - strand, within AO353_01950 at 413.004 kb on + strand, within AO353_01950 at 413.004 kb on + strand, within AO353_01950 at 413.004 kb on + strand, within AO353_01950 at 413.005 kb on - strand, within AO353_01950 at 413.005 kb on - strand, within AO353_01950 at 413.019 kb on + strand, within AO353_01950 at 413.019 kb on + strand, within AO353_01950 at 413.019 kb on + strand, within AO353_01950 at 413.019 kb on + strand, within AO353_01950 at 413.019 kb on + strand, within AO353_01950 at 413.020 kb on - strand, within AO353_01950 at 413.020 kb on - strand, within AO353_01950 at 413.020 kb on - strand, within AO353_01950 at 413.020 kb on - strand, within AO353_01950 at 413.044 kb on - strand, within AO353_01950 at 413.106 kb on + strand, within AO353_01950 at 413.106 kb on + strand, within AO353_01950 at 413.107 kb on - strand, within AO353_01950 at 413.107 kb on - strand, within AO353_01950 at 413.107 kb on - strand, within AO353_01950 at 413.107 kb on - strand, within AO353_01950 at 413.109 kb on + strand, within AO353_01950 at 413.109 kb on + strand, within AO353_01950 at 413.109 kb on + strand, within AO353_01950 at 413.109 kb on + strand, within AO353_01950 at 413.110 kb on - strand, within AO353_01950 at 413.110 kb on - strand, within AO353_01950 at 413.110 kb on - strand, within AO353_01950 at 413.110 kb on - strand, within AO353_01950 at 413.110 kb on - strand, within AO353_01950 at 413.124 kb on + strand, within AO353_01950 at 413.150 kb on + strand, within AO353_01950 at 413.187 kb on + strand, within AO353_01950 at 413.188 kb on - strand, within AO353_01950 at 413.188 kb on - strand, within AO353_01950 at 413.206 kb on - strand, within AO353_01950 at 413.248 kb on + strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.249 kb on - strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.298 kb on + strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.299 kb on - strand, within AO353_01950 at 413.327 kb on + strand, within AO353_01950 at 413.327 kb on + strand, within AO353_01950 at 413.328 kb on - strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.349 kb on + strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.350 kb on - strand, within AO353_01950 at 413.609 kb on - strand at 413.614 kb on - strand at 413.644 kb on + strand at 413.644 kb on + strand at 413.644 kb on + strand at 413.645 kb on - strand at 413.648 kb on + strand at 413.658 kb on + strand at 413.658 kb on + strand at 413.660 kb on + strand at 413.660 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 411,355 - AO353_01940 0.78 +0.6 411,371 + AO353_01940 0.79 +1.9 411,371 + AO353_01940 0.79 +0.5 411,371 + AO353_01940 0.79 -0.6 411,371 + AO353_01940 0.79 -0.5 411,372 - AO353_01940 0.80 -0.0 411,372 - AO353_01940 0.80 -0.8 411,372 - AO353_01940 0.80 +1.4 411,372 - AO353_01940 0.80 -0.3 411,583 + +0.1 411,583 + +1.5 411,583 + +0.4 411,583 + -0.2 411,583 + -0.8 411,583 + -0.9 411,583 + +1.2 411,584 - -0.4 411,584 - -0.6 411,643 + +0.6 411,644 - -0.7 411,645 + +0.9 411,645 + +0.5 411,645 + +0.9 411,645 + +1.2 411,645 + -0.1 411,645 + +0.1 411,645 + -0.1 411,718 + +0.3 411,719 - -0.7 411,719 - +1.0 411,719 - +0.9 411,719 - -1.4 411,722 + -0.9 411,722 + +1.7 411,722 + +0.3 411,723 - +0.3 411,723 - +1.2 411,723 - +0.9 411,738 + +1.9 411,738 + +0.3 411,739 - +0.0 411,740 + +1.9 411,740 + -0.5 411,752 + +0.9 411,753 - +1.3 411,839 - -0.4 411,975 - AO353_01945 0.14 -0.6 411,975 - AO353_01945 0.14 +0.9 411,975 - AO353_01945 0.14 -0.3 412,083 + AO353_01945 0.25 -0.3 412,083 + AO353_01945 0.25 -0.8 412,083 + AO353_01945 0.25 -1.5 412,084 - AO353_01945 0.26 +0.9 412,084 - AO353_01945 0.26 -0.1 412,233 + AO353_01945 0.42 +0.5 412,233 + AO353_01945 0.42 +1.1 412,234 - AO353_01945 0.42 +0.5 412,297 + AO353_01945 0.49 -2.0 412,298 - AO353_01945 0.49 +0.3 412,521 + AO353_01945 0.73 -0.6 412,521 + AO353_01945 0.73 -1.3 412,521 + AO353_01945 0.73 -0.6 412,521 + AO353_01945 0.73 +2.3 412,522 - AO353_01945 0.73 -1.4 412,528 - AO353_01945 0.74 -0.8 412,528 - AO353_01945 0.74 -0.2 412,528 - AO353_01945 0.74 -0.9 412,528 - AO353_01945 0.74 +0.3 412,596 - AO353_01945 0.81 +0.3 412,718 + +0.0 412,718 + +0.9 412,718 + -1.1 412,718 + -0.6 412,719 - +0.3 412,719 - +1.9 412,719 - +1.2 412,719 - +0.7 412,719 - -0.8 412,757 + -0.4 412,757 + +1.2 412,757 + +0.7 412,757 + +1.0 412,757 + -0.4 412,757 + -0.2 412,757 + -0.0 412,757 + -1.3 412,758 - +1.7 412,772 + +0.4 412,772 + +0.2 412,772 + -0.9 412,773 - +0.6 412,773 - -0.9 412,773 - +1.5 412,824 + +0.6 412,824 + +0.6 412,824 + +1.2 412,825 - -0.9 412,966 - AO353_01950 0.21 +0.2 412,966 - AO353_01950 0.21 +1.0 413,004 + AO353_01950 0.26 -0.4 413,004 + AO353_01950 0.26 +0.9 413,004 + AO353_01950 0.26 +0.9 413,005 - AO353_01950 0.26 +0.9 413,005 - AO353_01950 0.26 +0.4 413,019 + AO353_01950 0.28 +1.3 413,019 + AO353_01950 0.28 +1.9 413,019 + AO353_01950 0.28 -0.4 413,019 + AO353_01950 0.28 -0.2 413,019 + AO353_01950 0.28 -0.4 413,020 - AO353_01950 0.28 +0.6 413,020 - AO353_01950 0.28 -0.3 413,020 - AO353_01950 0.28 -1.3 413,020 - AO353_01950 0.28 -0.1 413,044 - AO353_01950 0.31 +0.9 413,106 + AO353_01950 0.38 -1.2 413,106 + AO353_01950 0.38 +0.4 413,107 - AO353_01950 0.38 -0.7 413,107 - AO353_01950 0.38 +0.7 413,107 - AO353_01950 0.38 +1.5 413,107 - AO353_01950 0.38 -0.2 413,109 + AO353_01950 0.39 +0.9 413,109 + AO353_01950 0.39 +0.1 413,109 + AO353_01950 0.39 +0.9 413,109 + AO353_01950 0.39 -1.9 413,110 - AO353_01950 0.39 +1.9 413,110 - AO353_01950 0.39 -0.2 413,110 - AO353_01950 0.39 -0.4 413,110 - AO353_01950 0.39 -0.1 413,110 - AO353_01950 0.39 +0.9 413,124 + AO353_01950 0.40 +0.1 413,150 + AO353_01950 0.44 -1.8 413,187 + AO353_01950 0.48 -0.0 413,188 - AO353_01950 0.48 -0.7 413,188 - AO353_01950 0.48 -0.2 413,206 - AO353_01950 0.50 -0.2 413,248 + AO353_01950 0.55 -0.3 413,249 - AO353_01950 0.56 -1.9 413,249 - AO353_01950 0.56 -0.9 413,249 - AO353_01950 0.56 +1.3 413,249 - AO353_01950 0.56 -0.1 413,249 - AO353_01950 0.56 +0.3 413,249 - AO353_01950 0.56 -0.0 413,298 + AO353_01950 0.61 -0.2 413,298 + AO353_01950 0.61 -1.1 413,298 + AO353_01950 0.61 -0.4 413,298 + AO353_01950 0.61 +0.7 413,298 + AO353_01950 0.61 +0.4 413,298 + AO353_01950 0.61 +0.0 413,298 + AO353_01950 0.61 -0.6 413,298 + AO353_01950 0.61 +1.9 413,298 + AO353_01950 0.61 +0.7 413,298 + AO353_01950 0.61 -1.7 413,298 + AO353_01950 0.61 +0.3 413,298 + AO353_01950 0.61 +1.0 413,298 + AO353_01950 0.61 +0.3 413,298 + AO353_01950 0.61 -0.8 413,299 - AO353_01950 0.62 +1.2 413,299 - AO353_01950 0.62 -0.2 413,299 - AO353_01950 0.62 -1.8 413,299 - AO353_01950 0.62 +0.1 413,299 - AO353_01950 0.62 +2.2 413,299 - AO353_01950 0.62 -1.1 413,299 - AO353_01950 0.62 +0.2 413,299 - AO353_01950 0.62 +0.5 413,299 - AO353_01950 0.62 +0.6 413,299 - AO353_01950 0.62 -0.1 413,299 - AO353_01950 0.62 +1.3 413,299 - AO353_01950 0.62 +1.0 413,299 - AO353_01950 0.62 +2.9 413,299 - AO353_01950 0.62 +1.2 413,299 - AO353_01950 0.62 +0.3 413,299 - AO353_01950 0.62 -0.4 413,299 - AO353_01950 0.62 -1.8 413,299 - AO353_01950 0.62 +0.5 413,299 - AO353_01950 0.62 -0.1 413,299 - AO353_01950 0.62 +0.6 413,299 - AO353_01950 0.62 +0.1 413,327 + AO353_01950 0.65 +0.1 413,327 + AO353_01950 0.65 +1.6 413,328 - AO353_01950 0.65 -1.7 413,349 + AO353_01950 0.68 +1.2 413,349 + AO353_01950 0.68 +0.5 413,349 + AO353_01950 0.68 -0.8 413,349 + AO353_01950 0.68 -0.4 413,349 + AO353_01950 0.68 -1.7 413,349 + AO353_01950 0.68 -0.1 413,349 + AO353_01950 0.68 -1.3 413,350 - AO353_01950 0.68 +1.2 413,350 - AO353_01950 0.68 +0.9 413,350 - AO353_01950 0.68 +0.5 413,350 - AO353_01950 0.68 -2.2 413,350 - AO353_01950 0.68 -0.9 413,350 - AO353_01950 0.68 -0.4 413,350 - AO353_01950 0.68 +0.7 413,350 - AO353_01950 0.68 +0.3 413,350 - AO353_01950 0.68 +0.7 413,350 - AO353_01950 0.68 -0.1 413,609 - +0.9 413,614 - -1.0 413,644 + +0.1 413,644 + -1.6 413,644 + -0.4 413,645 - +0.4 413,648 + +2.5 413,658 + +0.7 413,658 + +0.3 413,660 + +0.1 413,660 + -2.6
Or see this region's nucleotide sequence