Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00425 and AO353_00430 are separated by 169 nucleotides AO353_00430 and AO353_00435 are separated by 168 nucleotides
AO353_00425: AO353_00425 - class C beta-lactamase, at 82,168 to 83,328
_00425
AO353_00430: AO353_00430 - glyceraldehyde-3-phosphate dehydrogenase, at 83,498 to 84,961
_00430
AO353_00435: AO353_00435 - transcription-repair coupling factor, at 85,130 to 88,579
_00435
Position (kb) 83
84
85 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 82.589 kb on + strand, within AO353_00425 at 82.589 kb on + strand, within AO353_00425 at 82.646 kb on + strand, within AO353_00425 at 82.646 kb on + strand, within AO353_00425 at 82.646 kb on + strand, within AO353_00425 at 82.647 kb on - strand, within AO353_00425 at 82.658 kb on + strand, within AO353_00425 at 82.658 kb on + strand, within AO353_00425 at 82.658 kb on + strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.659 kb on - strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.805 kb on + strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.806 kb on - strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.829 kb on + strand, within AO353_00425 at 82.853 kb on + strand, within AO353_00425 at 82.853 kb on + strand, within AO353_00425 at 82.853 kb on + strand, within AO353_00425 at 82.853 kb on + strand, within AO353_00425 at 82.853 kb on + strand, within AO353_00425 at 82.854 kb on - strand, within AO353_00425 at 82.879 kb on + strand, within AO353_00425 at 82.880 kb on - strand, within AO353_00425 at 82.880 kb on - strand, within AO353_00425 at 82.979 kb on + strand, within AO353_00425 at 82.979 kb on + strand, within AO353_00425 at 82.979 kb on + strand, within AO353_00425 at 82.980 kb on - strand, within AO353_00425 at 82.980 kb on - strand, within AO353_00425 at 82.998 kb on + strand, within AO353_00425 at 82.999 kb on - strand, within AO353_00425 at 82.999 kb on - strand, within AO353_00425 at 83.027 kb on + strand, within AO353_00425 at 83.027 kb on + strand, within AO353_00425 at 83.027 kb on + strand, within AO353_00425 at 83.027 kb on + strand, within AO353_00425 at 83.132 kb on + strand, within AO353_00425 at 83.133 kb on - strand, within AO353_00425 at 83.133 kb on - strand, within AO353_00425 at 83.133 kb on - strand, within AO353_00425 at 83.186 kb on + strand, within AO353_00425 at 83.186 kb on + strand, within AO353_00425 at 83.186 kb on + strand, within AO353_00425 at 83.186 kb on + strand, within AO353_00425 at 83.186 kb on + strand, within AO353_00425 at 83.187 kb on - strand, within AO353_00425 at 83.187 kb on - strand, within AO353_00425 at 83.187 kb on - strand, within AO353_00425 at 83.187 kb on - strand, within AO353_00425 at 83.293 kb on + strand at 83.293 kb on + strand at 83.293 kb on + strand at 83.293 kb on + strand at 83.294 kb on - strand at 83.294 kb on - strand at 83.294 kb on - strand at 83.328 kb on + strand at 83.328 kb on + strand at 83.328 kb on + strand at 83.328 kb on + strand at 83.329 kb on - strand at 83.329 kb on - strand at 83.329 kb on - strand at 83.367 kb on + strand at 83.367 kb on + strand at 83.367 kb on + strand at 83.368 kb on - strand at 83.378 kb on + strand at 83.379 kb on - strand at 83.401 kb on - strand at 83.410 kb on + strand at 83.410 kb on + strand at 83.427 kb on - strand at 83.522 kb on + strand at 83.593 kb on - strand at 83.737 kb on - strand, within AO353_00430 at 83.746 kb on - strand, within AO353_00430 at 83.907 kb on - strand, within AO353_00430 at 84.227 kb on + strand, within AO353_00430 at 84.304 kb on - strand, within AO353_00430 at 84.304 kb on - strand, within AO353_00430 at 84.304 kb on - strand, within AO353_00430 at 84.537 kb on + strand, within AO353_00430 at 84.542 kb on + strand, within AO353_00430 at 84.542 kb on + strand, within AO353_00430 at 84.542 kb on + strand, within AO353_00430 at 84.543 kb on - strand, within AO353_00430 at 84.543 kb on - strand, within AO353_00430 at 84.543 kb on - strand, within AO353_00430 at 84.584 kb on + strand, within AO353_00430 at 84.585 kb on - strand, within AO353_00430 at 84.828 kb on + strand at 84.828 kb on + strand at 84.828 kb on + strand at 84.829 kb on - strand at 84.858 kb on + strand at 84.963 kb on + strand at 84.963 kb on + strand at 84.964 kb on - strand at 84.984 kb on - strand at 84.988 kb on + strand at 84.989 kb on - strand at 84.989 kb on - strand at 84.989 kb on - strand at 85.088 kb on + strand at 85.088 kb on + strand at 85.089 kb on - strand at 85.089 kb on - strand at 85.146 kb on + strand at 85.171 kb on + strand at 85.172 kb on - strand at 85.172 kb on - strand at 85.249 kb on + strand at 85.250 kb on - strand at 85.361 kb on + strand at 85.362 kb on - strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.390 kb on + strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.391 kb on - strand at 85.392 kb on + strand at 85.392 kb on + strand at 85.392 kb on + strand at 85.392 kb on + strand at 85.392 kb on + strand at 85.393 kb on - strand at 85.393 kb on - strand at 85.393 kb on - strand at 85.393 kb on - strand at 85.470 kb on + strand at 85.470 kb on + strand at 85.470 kb on + strand at 85.471 kb on - strand at 85.471 kb on - strand at 85.598 kb on + strand, within AO353_00435 at 85.598 kb on + strand, within AO353_00435 at 85.599 kb on - strand, within AO353_00435 at 85.599 kb on - strand, within AO353_00435 at 85.599 kb on - strand, within AO353_00435 at 85.599 kb on - strand, within AO353_00435 at 85.620 kb on + strand, within AO353_00435 at 85.620 kb on + strand, within AO353_00435 at 85.709 kb on - strand, within AO353_00435 at 85.885 kb on + strand, within AO353_00435 at 85.885 kb on + strand, within AO353_00435 at 85.886 kb on - strand, within AO353_00435 at 85.886 kb on - strand, within AO353_00435 at 85.886 kb on - strand, within AO353_00435 at 85.886 kb on - strand, within AO353_00435 at 85.904 kb on + strand, within AO353_00435 at 85.904 kb on + strand, within AO353_00435 at 85.904 kb on + strand, within AO353_00435 at 85.905 kb on - strand, within AO353_00435 at 85.905 kb on - strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.907 kb on + strand, within AO353_00435 at 85.908 kb on - strand, within AO353_00435 at 85.908 kb on - strand, within AO353_00435 at 85.908 kb on - strand, within AO353_00435 at 85.908 kb on - strand, within AO353_00435 at 85.949 kb on + strand, within AO353_00435 at 85.949 kb on + strand, within AO353_00435 at 85.950 kb on - strand, within AO353_00435
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 82,589 + AO353_00425 0.36 -0.3 82,589 + AO353_00425 0.36 -1.5 82,646 + AO353_00425 0.41 +2.0 82,646 + AO353_00425 0.41 +0.2 82,646 + AO353_00425 0.41 +1.0 82,647 - AO353_00425 0.41 -0.5 82,658 + AO353_00425 0.42 -3.1 82,658 + AO353_00425 0.42 +0.5 82,658 + AO353_00425 0.42 -0.2 82,659 - AO353_00425 0.42 +1.0 82,659 - +1.8 82,659 - AO353_00425 0.42 +1.8 82,659 - AO353_00425 0.42 -0.5 82,659 - AO353_00425 0.42 -1.3 82,659 - AO353_00425 0.42 -0.2 82,659 - AO353_00425 0.42 +0.9 82,659 - AO353_00425 0.42 -1.9 82,805 + AO353_00425 0.55 +0.8 82,805 + AO353_00425 0.55 -0.8 82,805 + AO353_00425 0.55 -1.3 82,805 + AO353_00425 0.55 -0.1 82,805 + AO353_00425 0.55 +0.5 82,805 + AO353_00425 0.55 +0.4 82,805 + AO353_00425 0.55 -0.8 82,805 + AO353_00425 0.55 +0.5 82,805 + AO353_00425 0.55 -2.0 82,806 - AO353_00425 0.55 +0.2 82,806 - AO353_00425 0.55 +0.2 82,806 - AO353_00425 0.55 +0.5 82,806 - AO353_00425 0.55 -0.3 82,806 - AO353_00425 0.55 -0.2 82,806 - AO353_00425 0.55 +0.5 82,806 - AO353_00425 0.55 -0.7 82,806 - AO353_00425 0.55 +0.4 82,806 - AO353_00425 0.55 +0.2 82,806 - AO353_00425 0.55 +1.2 82,829 + AO353_00425 0.57 -0.9 82,829 + AO353_00425 0.57 +1.0 82,829 + AO353_00425 0.57 -0.7 82,829 + AO353_00425 0.57 -0.5 82,829 + AO353_00425 0.57 +0.4 82,829 + AO353_00425 0.57 +0.5 82,829 + AO353_00425 0.57 +1.8 82,853 + AO353_00425 0.59 +2.2 82,853 + AO353_00425 0.59 +0.2 82,853 + AO353_00425 0.59 -0.2 82,853 + AO353_00425 0.59 +0.2 82,853 + AO353_00425 0.59 +1.2 82,854 - AO353_00425 0.59 -0.0 82,879 + AO353_00425 0.61 -2.0 82,880 - AO353_00425 0.61 +0.4 82,880 - AO353_00425 0.61 +0.2 82,979 + AO353_00425 0.70 -1.1 82,979 + AO353_00425 0.70 +1.0 82,979 + AO353_00425 0.70 +0.0 82,980 - AO353_00425 0.70 -0.8 82,980 - AO353_00425 0.70 -0.6 82,998 + AO353_00425 0.71 -0.4 82,999 - AO353_00425 0.72 -1.1 82,999 - AO353_00425 0.72 -0.2 83,027 + AO353_00425 0.74 -1.0 83,027 + AO353_00425 0.74 -0.6 83,027 + AO353_00425 0.74 -1.2 83,027 + AO353_00425 0.74 -0.3 83,132 + AO353_00425 0.83 -0.1 83,133 - AO353_00425 0.83 +1.1 83,133 - AO353_00425 0.83 -0.1 83,133 - AO353_00425 0.83 +0.2 83,186 + AO353_00425 0.88 -1.2 83,186 + AO353_00425 0.88 -0.8 83,186 + AO353_00425 0.88 -0.4 83,186 + AO353_00425 0.88 +0.2 83,186 + AO353_00425 0.88 +0.5 83,187 - AO353_00425 0.88 -1.1 83,187 - AO353_00425 0.88 -1.7 83,187 - AO353_00425 0.88 +0.2 83,187 - AO353_00425 0.88 -1.8 83,293 + +0.6 83,293 + +0.2 83,293 + +0.5 83,293 + -1.5 83,294 - -1.8 83,294 - -0.2 83,294 - +0.9 83,328 + +0.1 83,328 + +0.2 83,328 + +0.8 83,328 + -0.4 83,329 - +0.8 83,329 - -0.3 83,329 - +0.3 83,367 + -0.8 83,367 + -0.8 83,367 + +1.4 83,368 - +0.5 83,378 + -0.7 83,379 - +0.0 83,401 - +1.0 83,410 + -0.8 83,410 + +1.6 83,427 - +0.8 83,522 + -2.5 83,593 - +0.2 83,737 - AO353_00430 0.16 -0.8 83,746 - AO353_00430 0.17 -1.7 83,907 - AO353_00430 0.28 -0.2 84,227 + AO353_00430 0.50 -1.4 84,304 - AO353_00430 0.55 +1.0 84,304 - AO353_00430 0.55 +0.8 84,304 - AO353_00430 0.55 -1.0 84,537 + AO353_00430 0.71 -2.4 84,542 + AO353_00430 0.71 +0.8 84,542 + AO353_00430 0.71 -0.2 84,542 + AO353_00430 0.71 -0.2 84,543 - AO353_00430 0.71 -1.9 84,543 - AO353_00430 0.71 -0.5 84,543 - AO353_00430 0.71 -0.0 84,584 + AO353_00430 0.74 +0.2 84,585 - AO353_00430 0.74 +0.8 84,828 + -0.8 84,828 + -1.9 84,828 + -0.0 84,829 - -1.0 84,858 + +0.2 84,963 + -1.5 84,963 + -1.6 84,964 - -0.1 84,984 - -0.1 84,988 + -0.2 84,989 - -1.0 84,989 - +1.0 84,989 - +0.2 85,088 + +1.6 85,088 + +0.5 85,089 - +1.4 85,089 - -0.4 85,146 + +0.0 85,171 + -1.0 85,172 - +1.3 85,172 - -0.5 85,249 + -0.7 85,250 - +1.2 85,361 + -0.8 85,362 - +1.2 85,390 + -1.2 85,390 + +0.8 85,390 + -1.0 85,390 + -0.2 85,390 + -0.3 85,390 + +0.6 85,390 + +0.6 85,390 + +0.4 85,390 + -0.0 85,390 + +0.6 85,390 + +0.4 85,390 + +0.4 85,391 - +3.4 85,391 - +0.5 85,391 - -0.0 85,391 - +1.0 85,391 - +1.3 85,391 - +0.6 85,391 - +2.2 85,391 - -1.4 85,391 - -0.6 85,391 - +0.2 85,391 - +0.2 85,391 - +0.4 85,391 - -0.0 85,391 - -0.6 85,391 - +1.9 85,392 + -1.1 85,392 + -0.7 85,392 + +0.2 85,392 + -0.3 85,392 + +0.0 85,393 - +0.0 85,393 - -0.8 85,393 - -1.4 85,393 - +0.6 85,470 + -1.0 85,470 + -0.5 85,470 + +0.5 85,471 - +1.2 85,471 - +0.2 85,598 + AO353_00435 0.14 +0.8 85,598 + AO353_00435 0.14 +0.3 85,599 - AO353_00435 0.14 +0.3 85,599 - AO353_00435 0.14 +0.6 85,599 - AO353_00435 0.14 -0.4 85,599 - AO353_00435 0.14 -0.4 85,620 + AO353_00435 0.14 +0.4 85,620 + AO353_00435 0.14 -0.0 85,709 - AO353_00435 0.17 +0.5 85,885 + AO353_00435 0.22 +0.2 85,885 + AO353_00435 0.22 -0.4 85,886 - AO353_00435 0.22 +2.8 85,886 - AO353_00435 0.22 -1.2 85,886 - AO353_00435 0.22 -0.6 85,886 - AO353_00435 0.22 -0.4 85,904 + AO353_00435 0.22 +1.3 85,904 + AO353_00435 0.22 +1.0 85,904 + AO353_00435 0.22 +0.8 85,905 - AO353_00435 0.22 +0.3 85,905 - AO353_00435 0.22 -0.4 85,907 + AO353_00435 0.23 -0.4 85,907 + AO353_00435 0.23 -0.6 85,907 + AO353_00435 0.23 -0.0 85,907 + AO353_00435 0.23 +1.2 85,907 + AO353_00435 0.23 -1.2 85,907 + AO353_00435 0.23 +0.7 85,908 - AO353_00435 0.23 +0.1 85,908 - AO353_00435 0.23 -0.8 85,908 - AO353_00435 0.23 -1.2 85,908 - AO353_00435 0.23 +0.6 85,949 + AO353_00435 0.24 -0.4 85,949 + AO353_00435 0.24 -0.4 85,950 - AO353_00435 0.24 -0.4
Or see this region's nucleotide sequence