Strain Fitness in Shewanella loihica PV-4 around Shew_3839
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,568,081 | - | -1.9 | |||
4,568,097 | + | +0.1 | |||
4,568,149 | - | -0.0 | |||
4,568,149 | + | +0.2 | |||
4,568,150 | - | +0.2 | |||
4,568,159 | - | +0.2 | |||
4,568,178 | + | -0.1 | |||
4,568,178 | + | -0.1 | |||
4,568,178 | + | +0.1 | |||
4,568,186 | - | -0.1 | |||
4,568,259 | + | +0.1 | |||
4,568,272 | - | -0.1 | |||
4,568,298 | + | +0.6 | |||
4,568,298 | + | -0.6 | |||
4,568,298 | + | -0.0 | |||
4,568,316 | - | -0.3 | |||
4,568,316 | - | -2.8 | |||
4,568,345 | + | +0.3 | |||
4,568,353 | - | +0.4 | |||
4,568,386 | + | -1.6 | |||
4,568,495 | - | +0.2 | |||
4,568,501 | + | -1.8 | |||
4,568,577 | - | +0.8 | |||
4,568,671 | + | +0.1 | |||
4,568,678 | + | +0.8 | |||
4,568,678 | + | +0.2 | |||
4,568,686 | - | +0.2 | |||
4,568,739 | + | -0.6 | |||
4,568,744 | + | +0.7 | |||
4,568,778 | + | -0.0 | |||
4,568,786 | - | -0.5 | |||
4,568,786 | - | +1.0 | |||
4,568,802 | - | -0.1 | |||
4,568,845 | - | +1.0 | |||
4,568,873 | - | +1.6 | |||
4,568,962 | - | +0.3 | |||
4,568,974 | + | -0.8 | |||
4,571,561 | - | Shew_3840 | 0.87 | -0.1 | |
4,571,790 | - | +3.1 |
Or see this region's nucleotide sequence