Strain Fitness in Shewanella loihica PV-4 around Shew_3575

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
4,270,735	-		Shew_3574	0.85	+0.4
4,270,817	+				+0.4
4,270,919	+				+0.3
4,270,943	+				-0.1
4,270,951	-				+1.9
4,270,970	-				-0.5
4,270,987	+				+0.5
4,270,987	+				+0.1
4,270,995	-				+0.2
4,270,995	-				+0.2
4,270,995	-				-0.1
4,270,995	-				+0.1
4,270,995	-				-0.8
4,270,995	-				-0.2
4,270,995	-				-1.7
4,270,996	-				-0.3
4,271,006	-				-1.2
4,271,054	-				-0.7
4,271,090	+				+1.4
4,271,098	-				+0.1
4,271,098	-				+0.4
4,271,098	-				-5.6
4,271,149	+				+0.4
4,271,149	+				-0.2
4,271,150	-				+0.6
4,271,232	+				-0.6
4,271,249	+				-1.9
4,271,249	+				-0.1
4,271,249	+				-0.6
4,271,249	+				-0.1
4,271,249	+				-1.5
4,271,249	+				+0.0
4,271,249	+				-0.1
4,271,249	+				-0.8
4,271,257	-				+0.2
4,271,257	-				-0.0
4,271,257	-				-1.5
4,271,257	-				+0.1
4,271,257	-				+0.5
4,271,257	-				+0.1
4,271,257	-				-0.0
4,271,257	-				-0.1
4,271,257	-				+0.1
4,271,264	+				+0.1
4,271,266	+				+0.1
4,271,266	+				+0.2
4,271,266	+				+0.8
4,271,266	+				+0.4
4,271,266	+				-1.0
4,271,266	+				-0.2
4,271,269	-				-1.8
4,271,272	-				+0.4
4,271,272	-				-0.2
4,271,272	-				-0.3
4,271,272	-				-0.8
4,271,274	-				-0.1
4,271,274	-				+0.4
4,271,274	-				-0.4
4,271,274	-				+0.2
4,271,276	+				+1.8
4,271,276	+				-0.0
4,271,284	-				+0.1
4,271,284	-				+0.1
4,271,310	+				-1.9
4,271,310	+				-0.1
4,271,310	+				+0.7
4,271,310	+				+0.5
4,271,311	+				-0.8
4,271,311	+				-0.3
4,271,311	+				-0.9
4,271,311	+				+0.1
4,271,311	+				+1.1
4,271,311	+				+0.2
4,271,311	+				+3.4
4,271,311	+				+0.3
4,271,311	+				+0.9
4,271,311	+				+0.1
4,271,311	+				+1.2
4,271,318	-				+0.1
4,271,318	-				-1.8
4,271,318	-				-0.3
4,271,318	-				+0.2
4,271,318	-				-0.4
4,271,318	-				+0.0
4,271,319	-				+0.2
4,271,319	-				+0.0
4,271,319	-				-0.0
4,271,319	-				+1.0
4,271,319	-				+0.0
4,271,319	-				-0.0
4,271,319	-				-0.5
4,271,319	-				+0.3
4,271,319	-				+0.5
4,271,319	-				-0.7
4,271,319	-				+0.3
4,271,326	-				-0.1
4,271,352	+				-0.0
4,271,379	+				+0.1
4,271,403	+				-0.4
4,271,403	+				-1.9
4,271,403	+				+0.0
4,271,410	+				-0.9
4,271,410	+				-0.1
4,271,418	-				-0.6
4,271,418	-				+0.6
4,271,418	-				+0.7
4,271,418	-				+0.3
4,271,418	-				-0.3
4,271,418	-				-0.8
4,271,424	+				-3.4
4,271,424	+				-0.2
4,271,424	+				-1.7
4,271,432	-				+0.3
4,271,432	-				-0.2
4,271,432	-				+0.1
4,271,432	-				+0.3
4,271,432	-				-0.3
4,271,432	-				+0.7
4,271,437	-				+0.6
4,271,453	+				-0.2
4,271,453	+				-0.1
4,271,453	+				-0.1
4,271,453	+				+0.8
4,271,453	+				+0.1
4,271,453	+				-0.5
4,271,453	+				+0.3
4,271,453	+				-0.5
4,271,453	+				-0.8
4,271,453	+				+0.3
4,271,461	-				+0.2
4,271,461	-				-1.3
4,271,461	-				+0.2
4,271,461	-				-0.2
4,271,461	-				-1.2
4,271,461	-				-0.7
4,271,465	+				+0.6
4,271,465	+				+0.2
4,271,466	-				-0.4
4,271,467	+				-0.4
4,271,467	+				-2.0
4,271,472	-				+0.1
4,271,473	-				-0.3
4,271,473	-				-1.1
4,271,474	+				+0.7
4,271,475	-				-1.2
4,271,475	+				-0.1
4,271,475	+				-1.2
4,271,475	+				-0.9
4,271,475	+				-1.5
4,271,475	-				+0.1
4,271,476	+				-0.8
4,271,477	+				+0.2
4,271,477	+				-0.2
4,271,477	+				+0.5
4,271,477	+				+0.3
4,271,477	-				+0.4
4,271,477	+				+0.7
4,271,479	+				-2.5
4,271,479	+				+0.5
4,271,479	+				+0.9
4,271,479	+				+0.0
4,271,483	-				+0.5
4,271,485	-				+0.1
4,271,485	-				-0.2
4,271,487	-				+0.1
4,271,489	+				+0.9
4,271,489	+				-0.2
4,271,492	-				-0.1
4,271,497	-				-0.0
4,271,497	-				-0.2
4,271,527	+				-0.8
4,271,534	+				-0.2
4,271,535	+				-0.8
4,271,535	+				+1.1
4,271,535	+				+0.1
4,271,542	-				-0.3
4,271,542	-				+0.4
4,271,543	-				-0.9
4,271,543	-				+0.1
4,271,543	-				-0.3
4,271,550	-				+0.0
4,271,558	+				-0.4
4,271,566	-				+0.3
4,271,566	-				-0.3
4,271,576	+				-0.2
4,271,591	+				+0.4
4,271,599	-				+0.2
4,271,601	+				-0.9
4,271,601	+				+0.3
4,271,601	+				-0.3
4,271,602	+				-0.2
4,271,603	-				-0.4
4,271,609	-				-0.4
4,271,641	+				+1.5
4,271,652	+				+0.7
4,271,669	+				-0.2
4,271,669	+				+1.4
4,271,669	+				-0.9
4,271,674	+				-0.6
4,271,677	-				-3.8
4,271,677	-				+0.1
4,271,712	-				+1.0
4,271,738	+				+0.5
4,271,743	+		Shew_3575	0.11	+1.1
4,271,743	+		Shew_3575	0.11	-1.3
4,271,748	+		Shew_3575	0.12	-0.1
4,271,749	+		Shew_3575	0.12	-1.7
4,271,751	-		Shew_3575	0.13	-0.4
4,271,759	+		Shew_3575	0.14	+0.4
4,271,772	-		Shew_3575	0.17	-0.9
4,271,832	+		Shew_3575	0.31	+0.1
4,271,832	+		Shew_3575	0.31	-0.1
4,271,832	+		Shew_3575	0.31	-0.2
4,271,832	+		Shew_3575	0.31	-0.1
4,271,845	+		Shew_3575	0.34	-0.4
4,271,903	+		Shew_3575	0.46	+0.6
4,271,903	+		Shew_3575	0.46	-0.1
4,271,903	+		Shew_3575	0.46	+1.3
4,271,903	+		Shew_3575	0.46	-0.7
4,271,903	+		Shew_3575	0.46	-0.5
4,271,903	+		Shew_3575	0.46	+0.1
4,271,903	+		Shew_3575	0.46	+0.2
4,271,903	+		Shew_3575	0.46	+0.3
4,271,903	+		Shew_3575	0.46	-0.5
4,271,903	+		Shew_3575	0.46	+0.3
4,271,903	+		Shew_3575	0.46	+0.1
4,271,911	-		Shew_3575	0.48	-0.2
4,271,911	-		Shew_3575	0.48	-3.1
4,271,911	-		Shew_3575	0.48	+0.8
4,271,911	-		Shew_3575	0.48	+0.1
4,271,911	-		Shew_3575	0.48	-2.2
4,271,911	-		Shew_3575	0.48	-0.3
4,271,911	-		Shew_3575	0.48	+0.1
4,271,911	-		Shew_3575	0.48	+0.1
4,271,911	-		Shew_3575	0.48	+0.1
4,271,911	-		Shew_3575	0.48	-0.7
4,271,927	+		Shew_3575	0.52	+0.7
4,271,927	+		Shew_3575	0.52	+0.1
4,271,927	+		Shew_3575	0.52	-0.0
4,271,927	+		Shew_3575	0.52	-0.0
4,271,935	-		Shew_3575	0.54	+0.2
4,271,935	-		Shew_3575	0.54	+0.1
4,271,938	+		Shew_3575	0.54	+0.3
4,271,938	+		Shew_3575	0.54	+0.2
4,271,941	+		Shew_3575	0.55	-0.0
4,271,946	+		Shew_3575	0.56	-0.6
4,271,946	+		Shew_3575	0.56	-1.3
4,271,949	-		Shew_3575	0.57	+0.7
4,271,949	-		Shew_3575	0.57	+0.0
4,271,950	+		Shew_3575	0.57	-2.7
4,271,952	+		Shew_3575	0.57	+0.3
4,271,952	+		Shew_3575	0.57	-0.6
4,271,952	+		Shew_3575	0.57	+0.1
4,271,954	-		Shew_3575	0.58	-2.1
4,271,954	-		Shew_3575	0.58	+0.1
4,271,954	-		Shew_3575	0.58	-1.1
4,271,954	+		Shew_3575	0.58	+0.2
4,271,954	-		Shew_3575	0.58	-0.4
4,271,960	-		Shew_3575	0.59	-0.2
4,271,962	-		Shew_3575	0.60	-2.7
4,271,963	+		Shew_3575	0.60	+1.1
4,271,963	+		Shew_3575	0.60	+0.2
4,271,963	+		Shew_3575	0.60	-0.2
4,271,963	+		Shew_3575	0.60	+0.1
4,271,965	+		Shew_3575	0.60	+0.3
4,271,965	+		Shew_3575	0.60	-0.4
4,271,965	+		Shew_3575	0.60	+0.2
4,271,965	+		Shew_3575	0.60	-2.6
4,271,965	+		Shew_3575	0.60	-0.9
4,271,968	+		Shew_3575	0.61	+0.1
4,271,968	-		Shew_3575	0.61	+1.7
4,271,970	+		Shew_3575	0.61	+0.0
4,271,970	+		Shew_3575	0.61	+0.2
4,271,971	-		Shew_3575	0.62	-1.1
4,271,973	-		Shew_3575	0.62	+0.0
4,271,973	-		Shew_3575	0.62	-0.0
4,271,976	-		Shew_3575	0.63	+0.1
4,271,978	-		Shew_3575	0.63	+0.7
4,271,981	-		Shew_3575	0.64	-0.0
4,271,983	+		Shew_3575	0.64	-0.1
4,271,984	-		Shew_3575	0.64	-0.3
4,271,984	-		Shew_3575	0.64	-0.2
4,271,984	-		Shew_3575	0.64	-0.4
4,272,031	+		Shew_3575	0.75	-0.6
4,272,031	+		Shew_3575	0.75	-1.2
4,272,031	+		Shew_3575	0.75	-0.4
4,272,031	+		Shew_3575	0.75	-0.5
4,272,032	+		Shew_3575	0.75	-0.1
4,272,039	-		Shew_3575	0.77	+0.3
4,272,039	-		Shew_3575	0.77	-1.8
4,272,039	-		Shew_3575	0.77	+0.3
4,272,039	-		Shew_3575	0.77	+0.4
4,272,091	-		Shew_3575	0.88	+0.2
4,272,098	+		Shew_3575	0.90	+0.4
4,272,148	+				+0.5
4,272,156	-				+0.2
4,272,156	-				+0.1
4,272,159	+				-0.5
4,272,160	+				-0.4
4,272,160	+				-0.0
4,272,160	+				+0.5
4,272,168	-				+0.5
4,272,169	-				-0.5
4,272,175	-				+0.4
4,272,175	-				+0.0
4,272,180	+				-0.1
4,272,180	+				-0.6
4,272,180	+				+0.5
4,272,180	-				-0.2
4,272,184	+				-0.5
4,272,188	+				+0.5
4,272,188	-				-0.2
4,272,188	-				+0.6
4,272,199	+				+0.2
4,272,201	-				-0.2
4,272,207	-				-0.0
4,272,207	-				-0.5
4,272,207	-				-0.0
4,272,212	+				-1.9
4,272,219	+				+0.4
4,272,220	-				+0.9
4,272,250	+				-0.3
4,272,253	-				+0.1
4,272,271	+				-0.5
4,272,281	+				-0.3
4,272,298	-				+1.0
4,272,303	+				-0.9
4,272,303	-				-0.2
4,272,316	+				-0.7
4,272,316	+				-0.0
4,272,324	-				-0.1
4,272,336	+				+0.1
4,272,337	+				-0.4
4,272,344	-				+0.3
4,272,381	+				-0.1
4,272,389	-				-0.0
4,272,418	+				+1.1
4,272,418	+				+0.5
4,272,418	+				+0.0
4,272,421	-				-2.0
4,272,426	-				+0.2
4,272,428	+				-1.1
4,272,428	+				+1.3
4,272,428	+				-0.5
4,272,436	-				-0.2
4,272,437	-				-0.3
4,272,437	-				-0.7
4,272,452	+				+0.2
4,272,453	+				+0.0
4,272,453	+				-0.9
4,272,453	+				-1.8
4,272,461	-				+1.3
4,272,472	+				+0.3
4,272,472	+				+0.1
4,272,480	-				+0.5
4,272,525	+				-0.2
4,272,525	+				-0.3
4,272,525	+				-0.5
4,272,525	+				+0.1
4,272,525	+				-1.5
4,272,525	+				-0.3
4,272,531	+				-0.2
4,272,533	-				-1.7
4,272,538	-				+0.2
4,272,539	-				-1.2
4,272,540	+				+0.7
4,272,549	-				-2.2
4,272,550	+				-0.9
4,272,558	-				+0.6
4,272,562	+				+0.0
4,272,562	+				+1.3
4,272,562	+				+0.2
4,272,562	+				-0.0
4,272,562	+				-0.2
4,272,562	+				-0.3
4,272,562	+				+0.4
4,272,562	+				+0.3
4,272,562	+				+0.5
4,272,562	+				+1.0
4,272,562	+				-0.4
4,272,562	+				+0.8
4,272,562	+				+0.8
4,272,562	+				+1.8
4,272,562	+				+0.1
4,272,562	+				-0.4
4,272,562	+				+0.0
4,272,562	+				+0.3
4,272,562	+				+0.1
4,272,562	+				+0.2
4,272,562	+				-0.1
4,272,562	+				+0.1
4,272,565	-				-1.5
4,272,570	-				+0.1
4,272,570	-				-0.3
4,272,570	-				-2.5
4,272,570	-				+0.3
4,272,570	-				+1.0
4,272,570	-				-0.3
4,272,570	-				+0.5
4,272,570	-				-0.2
4,272,570	-				+0.4
4,272,570	-				+1.2
4,272,570	-				+0.4
4,272,570	-				-0.0
4,272,570	-				-0.5
4,272,570	-				-0.4
4,272,570	-				+0.4
4,272,570	-				+0.6
4,272,570	-				+0.5
4,272,570	-				+0.5
4,272,570	-				+0.0
4,272,574	+				+0.2
4,272,575	-				-0.2
4,272,578	+				-0.6
4,272,578	+				-3.2
4,272,582	-				+0.3
4,272,586	-				+0.4
4,272,586	+				-0.0
4,272,586	-				+0.0
4,272,588	+				-0.2
4,272,588	+				+0.1
4,272,588	+				+0.1
4,272,588	+				+0.0
4,272,588	+				-0.3
4,272,590	+				-0.4
4,272,594	-				-0.7
4,272,594	-				+1.5
4,272,594	-				+0.9
4,272,596	-				+1.1
4,272,596	-				-0.9
4,272,596	-				+0.1
4,272,596	-				-0.2
4,272,596	-				-0.5
4,272,596	-				+0.2
4,272,596	-				-0.0
4,272,600	-				-0.1
4,272,610	+				+0.2
4,272,610	-				-0.6
4,272,618	-				+0.2
4,272,618	-				+0.2
4,272,634	+				-0.4
4,272,634	+				+0.1
4,272,642	-				+0.1
4,272,642	-				+0.2
4,272,659	-				+0.4
4,272,663	+				+0.4
4,272,671	-				+0.1
4,272,679	-				+0.4
4,272,692	-				+0.1
4,272,692	-				+0.4
4,272,692	-				-0.3
4,272,701	+				-0.2
4,272,701	+				+0.4
4,272,701	+				+0.1
4,272,701	+				+1.0
4,272,701	+				+0.5
4,272,701	+				+0.9
4,272,702	+				+0.2
4,272,707	+				+0.3
4,272,707	+				+0.1
4,272,708	+				-1.0
4,272,721	-				+0.2
4,272,721	-				+0.6
4,272,721	-				-0.8
4,272,722	+				-3.1
4,272,732	+				-1.0
4,272,743	+				-0.1
4,272,743	+				+1.3
4,272,743	+				+0.5
4,272,751	-				-0.0
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