Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3473 and Shew_3474 are separated by 69 nucleotides Shew_3474 and Shew_3475 are separated by 238 nucleotides Shew_3475 and Shew_3476 are separated by 156 nucleotides
Shew_3473: Shew_3473 - response regulator receiver protein (RefSeq), at 4,158,437 to 4,160,185
_3473
Shew_3474: Shew_3474 - ATP-dependent DNA helicase RecQ (RefSeq), at 4,160,255 to 4,162,087
_3474
Shew_3475: Shew_3475 - hypothetical protein (RefSeq), at 4,162,326 to 4,162,790
_3475
Shew_3476: Shew_3476 - transporter DMT superfamily protein (RefSeq), at 4,162,947 to 4,163,834
_3476
Position (kb)
4160
4161
4162
4163 Strain fitness (log2 ratio)
-1
0
1 at 4159.442 kb on - strand, within Shew_3473 at 4159.476 kb on - strand, within Shew_3473 at 4159.519 kb on - strand, within Shew_3473 at 4159.651 kb on + strand, within Shew_3473 at 4159.770 kb on - strand, within Shew_3473 at 4159.817 kb on - strand, within Shew_3473 at 4159.999 kb on - strand, within Shew_3473 at 4160.455 kb on + strand, within Shew_3474 at 4160.529 kb on - strand, within Shew_3474 at 4160.579 kb on - strand, within Shew_3474 at 4160.583 kb on + strand, within Shew_3474 at 4160.616 kb on + strand, within Shew_3474 at 4160.673 kb on + strand, within Shew_3474 at 4160.793 kb on + strand, within Shew_3474 at 4160.866 kb on + strand, within Shew_3474 at 4160.866 kb on + strand, within Shew_3474 at 4160.874 kb on - strand, within Shew_3474 at 4161.971 kb on - strand at 4161.994 kb on - strand at 4161.994 kb on - strand at 4162.141 kb on + strand at 4162.307 kb on - strand at 4162.312 kb on - strand at 4162.353 kb on - strand at 4162.632 kb on - strand, within Shew_3475 at 4162.848 kb on + strand at 4162.856 kb on - strand at 4162.921 kb on + strand at 4163.023 kb on + strand at 4163.084 kb on - strand, within Shew_3476
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 4,159,442 - Shew_3473 0.57 +0.6 4,159,476 - Shew_3473 0.59 +0.0 4,159,519 - Shew_3473 0.62 +0.7 4,159,651 + Shew_3473 0.69 +0.0 4,159,770 - Shew_3473 0.76 +0.5 4,159,817 - Shew_3473 0.79 +1.2 4,159,999 - Shew_3473 0.89 +1.1 4,160,455 + Shew_3474 0.11 -0.3 4,160,529 - Shew_3474 0.15 -1.5 4,160,579 - Shew_3474 0.18 -0.5 4,160,583 + Shew_3474 0.18 -0.1 4,160,616 + Shew_3474 0.20 +0.1 4,160,673 + Shew_3474 0.23 -0.9 4,160,793 + Shew_3474 0.29 -0.5 4,160,866 + Shew_3474 0.33 -0.5 4,160,866 + Shew_3474 0.33 -0.6 4,160,874 - Shew_3474 0.34 -1.0 4,161,971 - +0.2 4,161,994 - -0.3 4,161,994 - -0.2 4,162,141 + +0.3 4,162,307 - -0.0 4,162,312 - -0.2 4,162,353 - +0.4 4,162,632 - Shew_3475 0.66 +0.1 4,162,848 + -0.0 4,162,856 - +0.3 4,162,921 + -0.6 4,163,023 + -0.3 4,163,084 - Shew_3476 0.15 -0.9
Or see this region's nucleotide sequence