Strain Fitness in Shewanella loihica PV-4 around Shew_3410

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
4,059,875	+		Shew_3409	0.13	+0.3
4,059,883	-		Shew_3409	0.14	+0.2
4,059,971	-		Shew_3409	0.23	-1.3
4,059,980	+		Shew_3409	0.24	-0.5
4,060,070	-		Shew_3409	0.32	-0.5
4,060,086	+		Shew_3409	0.34	-0.0
4,060,267	-		Shew_3409	0.51	+0.8
4,060,602	+		Shew_3409	0.84	-0.0
4,060,770	+				+0.3
4,060,770	+				+0.6
4,060,770	+				+0.3
4,060,778	-				+1.1
4,061,003	-				-0.6
4,061,107	-		Shew_3410	0.17	-1.4
4,061,169	+		Shew_3410	0.21	-1.9
4,061,404	+		Shew_3410	0.38	-2.3
4,061,412	-		Shew_3410	0.38	-1.7
4,061,419	-		Shew_3410	0.39	-1.6
4,061,440	+		Shew_3410	0.40	-2.0
4,061,525	-		Shew_3410	0.46	-3.0
4,061,565	+		Shew_3410	0.49	-2.4
4,061,948	-		Shew_3410	0.76	-1.5
4,062,004	+		Shew_3410	0.80	-2.0
4,062,104	-		Shew_3410	0.87	-2.6
4,062,290	+				-1.8
4,062,344	-	zntR	Shew_3411	0.11	-0.4
4,062,370	-	zntR	Shew_3411	0.16	-0.2
4,062,499	-	zntR	Shew_3411	0.43	+1.2
4,062,509	-	zntR	Shew_3411	0.45	+0.1
4,062,596	-	zntR	Shew_3411	0.64	-0.4
4,062,655	-	zntR	Shew_3411	0.76	-0.3
4,062,655	-	zntR	Shew_3411	0.76	-0.0
4,062,655	-	zntR	Shew_3411	0.76	-0.3
4,062,832	+				+0.1