Strain Fitness in Shewanella loihica PV-4 around Shew_3405

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
4,053,795	+		Shew_3403	0.49	-0.8
4,053,901	-		Shew_3403	0.62	-0.6
4,053,901	-		Shew_3403	0.62	+0.4
4,053,976	+		Shew_3403	0.72	-0.5
4,054,043	-		Shew_3403	0.80	+0.6
4,054,558	-		Shew_3404	0.67	+0.6
4,054,685	-				-0.3
4,054,716	-				+0.2
4,054,723	+				+0.2
4,054,723	+				-0.1
4,054,723	+				-0.6
4,054,723	+				+0.4
4,054,723	+				-0.6
4,054,731	-				+0.3
4,054,731	-				-0.0
4,054,731	-				-0.1
4,054,731	-				-0.1
4,054,752	-				+0.1
4,054,859	+				-0.5
4,054,905	-				-0.5
4,054,905	-				-0.2
4,054,962	+		Shew_3405	0.12	-0.7
4,055,151	+		Shew_3405	0.23	-0.1
4,055,214	-		Shew_3405	0.27	-3.0
4,055,272	+		Shew_3405	0.31	-1.0
4,055,339	-		Shew_3405	0.35	-1.0
4,055,443	-		Shew_3405	0.41	-0.3
4,055,535	-		Shew_3405	0.47	-1.2
4,055,629	-		Shew_3405	0.53	-0.9
4,055,629	-		Shew_3405	0.53	-1.2
4,055,767	+		Shew_3405	0.61	-4.6
4,055,860	-		Shew_3405	0.67	-1.5
4,055,982	+		Shew_3405	0.75	-1.1
4,055,982	+		Shew_3405	0.75	-0.6
4,055,990	-		Shew_3405	0.75	+0.1
4,055,990	-		Shew_3405	0.75	-0.7
4,055,990	-		Shew_3405	0.75	-1.4
4,056,077	+		Shew_3405	0.80	-1.8
4,056,104	-		Shew_3405	0.82	-0.7
4,056,317	-				-0.1
4,056,728	+		Shew_3406	0.31	+1.1
4,056,728	+		Shew_3406	0.31	-0.1
4,056,868	+		Shew_3406	0.44	+0.9
4,056,879	+		Shew_3406	0.45	+0.6
4,056,879	+		Shew_3406	0.45	+0.8
4,056,887	-		Shew_3406	0.46	-0.1
4,056,887	-		Shew_3406	0.46	+0.3
4,056,929	-		Shew_3406	0.50	+0.5
4,057,109	+		Shew_3406	0.67	+1.0
4,057,318	+		Shew_3406	0.86	+1.0
4,057,318	-		Shew_3406	0.86	+0.5