Strain Fitness in Shewanella loihica PV-4 around Shew_3273
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,915,538 | + | Shew_3272 | 0.47 | +0.4 | |
3,915,546 | - | Shew_3272 | 0.48 | +0.6 | |
3,915,565 | - | Shew_3272 | 0.50 | +1.1 | |
3,915,590 | + | Shew_3272 | 0.52 | +0.5 | |
3,915,819 | - | Shew_3272 | 0.74 | +0.6 | |
3,916,020 | + | +0.5 | |||
3,916,050 | - | -0.0 | |||
3,916,330 | - | Shew_3273 | 0.29 | -2.3 | |
3,916,387 | - | Shew_3273 | 0.42 | -2.5 | |
3,916,513 | - | Shew_3273 | 0.71 | -2.7 | |
3,916,589 | - | Shew_3273 | 0.89 | -0.6 | |
3,916,643 | - | -2.2 | |||
3,916,979 | + | -0.0 | |||
3,916,992 | - | +0.1 | |||
3,917,055 | + | Shew_3274 | 0.11 | -0.0 | |
3,917,229 | + | Shew_3274 | 0.28 | +0.0 | |
3,917,237 | - | Shew_3274 | 0.29 | +0.7 |
Or see this region's nucleotide sequence