Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3271 and Shew_3272 are separated by 111 nucleotides Shew_3272 and Shew_3273 are separated by 116 nucleotides Shew_3273 and Shew_3274 are separated by 310 nucleotides
Shew_3271: Shew_3271 - galactokinase (RefSeq), at 3,913,768 to 3,914,934
_3271
Shew_3272: Shew_3272 - Aldose 1-epimerase (EC 5.1.3.3) (from data) , at 3,915,046 to 3,916,086
_3272
Shew_3273: Shew_3273 - hypothetical protein (RefSeq), at 3,916,203 to 3,916,637
_3273
Shew_3274: Shew_3274 - alcohol dehydrogenase (RefSeq), at 3,916,948 to 3,917,961
_3274
Position (kb)
3915
3916
3917 Strain fitness (log2 ratio)
-2
-1
0
1 at 3914.184 kb on - strand, within Shew_3271 at 3914.208 kb on + strand, within Shew_3271 at 3914.389 kb on - strand, within Shew_3271 at 3914.501 kb on + strand, within Shew_3271 at 3914.509 kb on - strand, within Shew_3271 at 3914.612 kb on + strand, within Shew_3271 at 3914.878 kb on + strand at 3914.913 kb on - strand at 3915.538 kb on + strand, within Shew_3272 at 3915.546 kb on - strand, within Shew_3272 at 3915.565 kb on - strand, within Shew_3272 at 3915.590 kb on + strand, within Shew_3272 at 3915.819 kb on - strand, within Shew_3272 at 3916.020 kb on + strand at 3916.050 kb on - strand at 3916.330 kb on - strand, within Shew_3273 at 3916.387 kb on - strand, within Shew_3273 at 3916.513 kb on - strand, within Shew_3273 at 3916.589 kb on - strand, within Shew_3273 at 3916.643 kb on - strand at 3916.979 kb on + strand at 3916.992 kb on - strand at 3917.055 kb on + strand, within Shew_3274
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,914,184 - Shew_3271 0.36 +0.8 3,914,208 + Shew_3271 0.38 +0.6 3,914,389 - Shew_3271 0.53 +0.6 3,914,501 + Shew_3271 0.63 +1.1 3,914,509 - Shew_3271 0.63 +0.3 3,914,612 + Shew_3271 0.72 +0.9 3,914,878 + +1.3 3,914,913 - +0.5 3,915,538 + Shew_3272 0.47 +0.4 3,915,546 - Shew_3272 0.48 +0.6 3,915,565 - Shew_3272 0.50 +1.1 3,915,590 + Shew_3272 0.52 +0.5 3,915,819 - Shew_3272 0.74 +0.6 3,916,020 + +0.5 3,916,050 - -0.0 3,916,330 - Shew_3273 0.29 -2.3 3,916,387 - Shew_3273 0.42 -2.5 3,916,513 - Shew_3273 0.71 -2.7 3,916,589 - Shew_3273 0.89 -0.6 3,916,643 - -2.2 3,916,979 + -0.0 3,916,992 - +0.1 3,917,055 + Shew_3274 0.11 -0.0
Or see this region's nucleotide sequence