Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3203 and Shew_3204 are separated by 36 nucleotides Shew_3204 and Shew_3205 are separated by 375 nucleotides Shew_3205 and Shew_3206 overlap by 4 nucleotides
Shew_3203: Shew_3203 - hypothetical protein (RefSeq), at 3,821,113 to 3,822,351
_3203
Shew_3204: Shew_3204 - cytochrome B561 (RefSeq), at 3,822,388 to 3,822,966
_3204
Shew_3205: Shew_3205 - NapD family protein (RefSeq), at 3,823,342 to 3,823,611
_3205
Shew_3206: Shew_3206 - nitrate reductase (RefSeq), at 3,823,608 to 3,826,091
_3206
Position (kb)
3822
3823 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3821.435 kb on + strand, within Shew_3203 at 3821.458 kb on - strand, within Shew_3203 at 3821.574 kb on + strand, within Shew_3203 at 3821.574 kb on + strand, within Shew_3203 at 3821.686 kb on + strand, within Shew_3203 at 3821.689 kb on - strand, within Shew_3203 at 3821.820 kb on - strand, within Shew_3203 at 3822.047 kb on + strand, within Shew_3203 at 3822.055 kb on - strand, within Shew_3203 at 3822.290 kb on + strand at 3822.693 kb on - strand, within Shew_3204 at 3822.711 kb on + strand, within Shew_3204 at 3822.719 kb on - strand, within Shew_3204 at 3822.865 kb on - strand, within Shew_3204 at 3823.966 kb on + strand, within Shew_3206
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,821,435 + Shew_3203 0.26 +0.4 3,821,458 - Shew_3203 0.28 -0.1 3,821,574 + Shew_3203 0.37 +0.1 3,821,574 + Shew_3203 0.37 +0.2 3,821,686 + Shew_3203 0.46 -0.2 3,821,689 - Shew_3203 0.46 +1.4 3,821,820 - Shew_3203 0.57 -2.4 3,822,047 + Shew_3203 0.75 +0.5 3,822,055 - Shew_3203 0.76 -0.9 3,822,290 + +0.8 3,822,693 - Shew_3204 0.53 +0.3 3,822,711 + Shew_3204 0.56 +0.1 3,822,719 - Shew_3204 0.57 +1.6 3,822,865 - Shew_3204 0.82 +2.2 3,823,966 + Shew_3206 0.14 +0.0
Or see this region's nucleotide sequence