Strain Fitness in Shewanella loihica PV-4 around Shew_3181

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
3,785,858	+		Shew_3180	0.46	+0.3
3,786,127	+		Shew_3180	0.83	+0.5
3,786,137	-		Shew_3180	0.85	+0.5
3,786,160	+		Shew_3180	0.88	-0.6
3,786,207	-				+1.8
3,786,214	+				+0.2
3,786,232	-				+0.1
3,786,345	+				+0.0
3,786,611	-				+0.8
3,786,957	-				+0.4
3,787,042	+		Shew_3181	0.15	+0.2
3,787,073	-		Shew_3181	0.16	+0.1
3,787,123	+		Shew_3181	0.19	-1.1
3,787,448	-		Shew_3181	0.39	-1.3
3,787,450	-		Shew_3181	0.39	-0.0
3,787,450	-		Shew_3181	0.39	-0.1
3,787,450	-		Shew_3181	0.39	+0.0
3,787,962	-		Shew_3181	0.70	-0.6
3,788,269	+		Shew_3181	0.88	+0.7
3,788,989	+				-0.3
3,788,997	+				-0.6
3,789,132	+				+0.8
3,789,200	-				-0.8
3,789,283	+				+0.4
3,789,329	-		Shew_3183	0.20	-1.3
3,789,384	+		Shew_3183	0.34	+0.2
3,789,432	+		Shew_3183	0.47	-1.9