Strain Fitness in Shewanella loihica PV-4 around Shew_3131
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,722,022 | + | +0.2 | |||
3,722,030 | - | Shew_3130 | 0.10 | +0.5 | |
3,722,156 | + | Shew_3130 | 0.24 | +0.7 | |
3,722,380 | + | Shew_3130 | 0.47 | +0.2 | |
3,722,386 | - | Shew_3130 | 0.47 | +0.9 | |
3,722,737 | + | Shew_3130 | 0.84 | +0.4 | |
3,722,822 | - | +0.2 | |||
3,722,901 | + | +0.1 | |||
3,722,991 | + | -3.3 | |||
3,723,576 | + | Shew_3131 | 0.42 | -3.9 | |
3,723,992 | + | Shew_3131 | 0.71 | -3.0 | |
3,724,239 | + | Shew_3131 | 0.88 | -1.4 | |
3,724,310 | + | +0.5 |
Or see this region's nucleotide sequence