Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3041 and Shew_3042 are separated by 78 nucleotides Shew_3042 and Shew_3043 are separated by 190 nucleotides Shew_3043 and Shew_3044 are separated by 307 nucleotides
Shew_3041: Shew_3041 - hypothetical protein (RefSeq), at 3,613,158 to 3,614,087
_3041
Shew_3042: Shew_3042 - hypothetical protein (RefSeq), at 3,614,166 to 3,614,552
_3042
Shew_3043: Shew_3043 - hypothetical protein (RefSeq), at 3,614,743 to 3,614,991
_3043
Shew_3044: Shew_3044 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,615,299 to 3,617,365
_3044
Position (kb)
3614
3615 Strain fitness (log2 ratio)
-1
0
1 at 3613.328 kb on + strand, within Shew_3041 at 3613.501 kb on + strand, within Shew_3041 at 3613.565 kb on - strand, within Shew_3041 at 3613.821 kb on + strand, within Shew_3041 at 3613.829 kb on - strand, within Shew_3041 at 3613.873 kb on - strand, within Shew_3041 at 3614.031 kb on - strand at 3614.234 kb on + strand, within Shew_3042 at 3614.367 kb on - strand, within Shew_3042 at 3614.369 kb on + strand, within Shew_3042 at 3614.381 kb on + strand, within Shew_3042 at 3614.381 kb on + strand, within Shew_3042 at 3614.650 kb on - strand at 3615.379 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,613,328 + Shew_3041 0.18 -0.6 3,613,501 + Shew_3041 0.37 -0.2 3,613,565 - Shew_3041 0.44 +0.7 3,613,821 + Shew_3041 0.71 +0.4 3,613,829 - Shew_3041 0.72 +0.2 3,613,873 - Shew_3041 0.77 -0.5 3,614,031 - +0.7 3,614,234 + Shew_3042 0.18 +0.9 3,614,367 - Shew_3042 0.52 +0.2 3,614,369 + Shew_3042 0.52 +0.4 3,614,381 + Shew_3042 0.56 +0.1 3,614,381 + Shew_3042 0.56 +0.2 3,614,650 - -0.1 3,615,379 + +0.1
Or see this region's nucleotide sequence