Strain Fitness in Shewanella loihica PV-4 around Shew_2958
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,505,053 | + | Shew_2956 | 0.56 | +2.7 | |
3,505,182 | + | Shew_2956 | 0.78 | +0.0 | |
3,505,270 | - | +0.5 | |||
3,505,583 | + | Shew_2957 | 0.54 | -0.0 | |
3,505,646 | + | Shew_2957 | 0.66 | +0.5 | |
3,506,406 | + | Shew_2958 | 0.62 | -2.6 | |
3,506,904 | - | +0.5 | |||
3,507,165 | + | Shew_2959 | 0.35 | +1.3 | |
3,507,426 | + | Shew_2959 | 0.63 | -0.1 | |
3,507,426 | + | Shew_2959 | 0.63 | +0.4 | |
3,507,445 | + | Shew_2959 | 0.65 | +3.1 | |
3,507,687 | - | -0.1 | |||
3,507,722 | - | -0.1 |
Or see this region's nucleotide sequence