Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2860 and Shew_2861 overlap by 4 nucleotides Shew_2861 and Shew_2862 are separated by 4 nucleotides Shew_2862 and Shew_2863 are separated by 14 nucleotides
Shew_2860: Shew_2860 - acyl-CoA dehydrogenase domain-containing protein (RefSeq), at 3,391,405 to 3,392,703
_2860
Shew_2861: Shew_2861 - aminoglycoside phosphotransferase (RefSeq), at 3,392,700 to 3,393,737
_2861
Shew_2862: Shew_2862 - short chain dehydrogenase (RefSeq), at 3,393,742 to 3,394,509
_2862
Shew_2863: Shew_2863 - short-chain dehydrogenase/reductase SDR (RefSeq), at 3,394,524 to 3,395,270
_2863
Position (kb)
3392
3393
3394 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3392.075 kb on - strand, within Shew_2860 at 3392.527 kb on + strand, within Shew_2860 at 3392.818 kb on - strand, within Shew_2861 at 3392.848 kb on + strand, within Shew_2861 at 3392.856 kb on - strand, within Shew_2861 at 3392.961 kb on + strand, within Shew_2861 at 3392.961 kb on + strand, within Shew_2861 at 3393.091 kb on - strand, within Shew_2861 at 3393.139 kb on + strand, within Shew_2861 at 3393.139 kb on + strand, within Shew_2861 at 3393.309 kb on - strand, within Shew_2861 at 3393.369 kb on + strand, within Shew_2861 at 3393.371 kb on + strand, within Shew_2861 at 3393.974 kb on + strand, within Shew_2862 at 3394.038 kb on + strand, within Shew_2862 at 3394.598 kb on + strand at 3394.606 kb on - strand, within Shew_2863 at 3394.606 kb on - strand, within Shew_2863
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,392,075 - Shew_2860 0.52 -0.0 3,392,527 + Shew_2860 0.86 +0.2 3,392,818 - Shew_2861 0.11 +0.7 3,392,848 + Shew_2861 0.14 -1.2 3,392,856 - Shew_2861 0.15 -3.5 3,392,961 + Shew_2861 0.25 +0.1 3,392,961 + Shew_2861 0.25 +0.6 3,393,091 - Shew_2861 0.38 +0.2 3,393,139 + Shew_2861 0.42 -0.6 3,393,139 + Shew_2861 0.42 -0.9 3,393,309 - Shew_2861 0.59 +0.4 3,393,369 + Shew_2861 0.64 -1.9 3,393,371 + Shew_2861 0.65 -0.6 3,393,974 + Shew_2862 0.30 -1.4 3,394,038 + Shew_2862 0.39 +0.2 3,394,598 + +0.6 3,394,606 - Shew_2863 0.11 +0.4 3,394,606 - Shew_2863 0.11 -0.4
Or see this region's nucleotide sequence