Strain Fitness in Shewanella loihica PV-4 around Shew_2780
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,288,391 | + | Shew_2779 | 0.36 | -0.4 | |
| 3,288,783 | + | Shew_2779 | 0.85 | -2.4 | |
| 3,288,791 | - | Shew_2779 | 0.86 | +0.2 | |
| 3,288,882 | + | -0.1 | |||
| 3,288,890 | - | -0.0 | |||
| 3,288,890 | - | +0.4 | |||
| 3,289,075 | + | Shew_2780 | 0.18 | +1.8 | |
| 3,289,603 | - | -0.2 | |||
| 3,289,801 | + | Shew_2781 | 0.23 | -0.2 | |
| 3,290,032 | - | Shew_2781 | 0.38 | +0.7 | |
| 3,290,099 | + | Shew_2781 | 0.43 | +0.3 | |
| 3,290,107 | - | Shew_2781 | 0.43 | -0.3 | |
| 3,290,410 | + | Shew_2781 | 0.64 | +0.4 |
Or see this region's nucleotide sequence