Strain Fitness in Shewanella loihica PV-4 around Shew_2637
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,111,504 | + | +2.3 | |||
| 3,111,525 | + | -0.3 | |||
| 3,111,783 | + | -1.3 | |||
| 3,112,140 | - | Shew_2637 | 0.23 | -0.3 | |
| 3,112,644 | - | Shew_2637 | 0.42 | -0.3 | |
| 3,112,651 | + | Shew_2637 | 0.43 | -1.6 | |
| 3,113,164 | + | Shew_2637 | 0.63 | +2.3 | |
| 3,113,283 | - | Shew_2637 | 0.67 | +1.5 | |
| 3,113,384 | - | Shew_2637 | 0.71 | -1.3 | |
| 3,113,597 | + | Shew_2637 | 0.79 | -1.3 |
Or see this region's nucleotide sequence